dbCAN Logo

Cluster: Rep_223_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_223_c_207 Rep_223_c_207_3 5663 6661 + GH43_31
CAZyme Rep_223_c_207 Rep_223_c_207_4 6680 8692 + GH182
NULL(UNKNOWN) Rep_223_c_207 Rep_223_c_207_5 8776 8919 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_223_c_207 Rep_223_c_207_6 8867 12232 + 1.B.14.6.1
pfam Rep_223_c_207 Rep_223_c_207_7 12258 14105 + SusD_RagB | TPR_6 | SusD-like_3
CAZyme Rep_223_c_207 Rep_223_c_207_8 14136 15155 + GH43_3
CAZyme Rep_223_c_207 Rep_223_c_207_9 15325 16599 + GT4
CAZyme Rep_223_c_207 Rep_223_c_207_10 16596 17369 + GT2
Gene ID: Rep_223_c_207_3
Type: CAZyme
Location: 5663 - 6661 (+)
Gene ID: Rep_223_c_207_4
Type: CAZyme
Location: 6680 - 8692 (+)
Gene ID: Rep_223_c_207_5
Type:
Location: 8776 - 8919 (+)
Gene ID: Rep_223_c_207_6
Type: TC
Location: 8867 - 12232 (+)
Gene ID: Rep_223_c_207_7
Type: pfam
Location: 12258 - 14105 (+)
Gene ID: Rep_223_c_207_8
Type: CAZyme
Location: 14136 - 15155 (+)
Gene ID: Rep_223_c_207_9
Type: CAZyme
Location: 15325 - 16599 (+)
Gene ID: Rep_223_c_207_10
Type: CAZyme
Location: 16596 - 17369 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List