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Genome Details

Selected Rep_genome_ID: Rep_185
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp000436595
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG483_29 3,356,748 98.75% 0.12% NA Africa H3AfricaPhase2
MGYG000001042 3,438,278 98.38% 0% Denmark Europe UHGG
Rep_185 3,411,581 98.865% 0% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_185_CGC37 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_185_CGC20 CGCFAM_00003 Yes 7 2
Rep_185_CGC21 CGCFAM_00034 Yes 7 4
Rep_185_CGC32 CGCFAM_00043 Yes 8 3 alpha-glucan
Rep_185_CGC10 CGCFAM_00072 Yes 4 2
Rep_185_CGC35 CGCFAM_00129 Yes 11 6 beta-mannan
Rep_185_CGC1 CGCFAM_00136 Yes 15 4 pectin
Rep_185_CGC30 CGCFAM_00136 Yes 11 4 pectin
Rep_185_CGC25 CGCFAM_00180 Yes 5 1
Rep_185_CGC4 CGCFAM_00189 Yes 5 2
Rep_185_CGC23 CGCFAM_00337 Yes 6 1
Rep_185_CGC26 CGCFAM_00709 Yes 4 2
Rep_185_CGC12 CGCFAM_00776 Yes 8 2
Rep_185_CGC41 CGCFAM_00793 Yes 4 1
Rep_185_CGC33 CGCFAM_02165 Yes 5 2
Rep_185_CGC3 CGCFAM_02251 Yes 8 1
Rep_185_CGC13 CGCFAM_02868 Yes 7 1
Rep_185_CGC5 CGCFAM_03392 Yes 8 3
Rep_185_CGC34 CGCFAM_03865 Yes 25 10
Rep_185_CGC39 CGCFAM_05032 Yes 5 1
Rep_185_CGC15 CGCFAM_05953 Yes 4 3
Rep_185_CGC16 CGCFAM_05954 Yes 4 2
Rep_185_CGC19 CGCFAM_07785 Yes 5 1
Rep_185_CGC18 CGCFAM_09616 Yes 4 1
Rep_185_CGC17 CGCFAM_11035 Yes 5 1
Top CAZyme Families