dbCAN Logo

Cluster: Rep_185_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_185_c_1 Rep_185_c_1_1499 1741640 1743109 - 2.A.1.1.3
TC Rep_185_c_1 Rep_185_c_1_1500 1743277 1744611 - 2.A.66.1.32
pfam Rep_185_c_1 Rep_185_c_1_1501 1745207 1746220 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme Rep_185_c_1 Rep_185_c_1_1502 1746259 1747797 - GT83
TC Rep_185_c_1 Rep_185_c_1_1503 1747802 1748425 - 2.A.123.4.1
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_1504 1748433 1748612 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_185_c_1 Rep_185_c_1_1505 1748612 1749163 - GT2
Gene ID: Rep_185_c_1_1499
Type: TC
Location: 1741640 - 1743109 (-)
Gene ID: Rep_185_c_1_1500
Type: TC
Location: 1743277 - 1744611 (-)
Gene ID: Rep_185_c_1_1501
Type: pfam
Location: 1745207 - 1746220 (-)
Gene ID: Rep_185_c_1_1502
Type: CAZyme
Location: 1746259 - 1747797 (-)
Gene ID: Rep_185_c_1_1503
Type: TC
Location: 1747802 - 1748425 (-)
Gene ID: Rep_185_c_1_1504
Type:
Location: 1748433 - 1748612 (-)
Gene ID: Rep_185_c_1_1505
Type: CAZyme
Location: 1748612 - 1749163 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List