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Cluster: Rep_185_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_185_c_1 Rep_185_c_1_136 161929 163608 + 2.A.17.4.5
CAZyme Rep_185_c_1 Rep_185_c_1_137 163734 165107 + GH28
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_138 165231 165371 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_185_c_1 Rep_185_c_1_139 165491 166081 - GerE
TC Rep_185_c_1 Rep_185_c_1_140 166193 167350 - 3.B.1.1.2
pfam Rep_185_c_1 Rep_185_c_1_141 167485 167931 - Biotin_lipoyl | Biotin_lipoyl_2
pfam Rep_185_c_1 Rep_185_c_1_142 167981 168946 - OAD_gamma
TC Rep_185_c_1 Rep_185_c_1_143 169069 170757 - 2.A.81.1.2
Gene ID: Rep_185_c_1_136
Type: TC
Location: 161929 - 163608 (+)
Gene ID: Rep_185_c_1_137
Type: CAZyme
Location: 163734 - 165107 (+)
Gene ID: Rep_185_c_1_138
Type:
Location: 165231 - 165371 (-)
Gene ID: Rep_185_c_1_139
Type: TF
Location: 165491 - 166081 (-)
Gene ID: Rep_185_c_1_140
Type: TC
Location: 166193 - 167350 (-)
Gene ID: Rep_185_c_1_141
Type: pfam
Location: 167485 - 167931 (-)
Gene ID: Rep_185_c_1_142
Type: pfam
Location: 167981 - 168946 (-)
Gene ID: Rep_185_c_1_143
Type: TC
Location: 169069 - 170757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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