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Cluster: Rep_185_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_185_c_1 Rep_185_c_1_2192 2634759 2636918 + GH97
TC Rep_185_c_1 Rep_185_c_1_2193 2637234 2640239 + 1.B.14.6.1
TC Rep_185_c_1 Rep_185_c_1_2194 2640253 2641746 + 8.A.46.1.3
pfam Rep_185_c_1 Rep_185_c_1_2195 2641803 2643263 + SusE | SusF_SusE | SusF_SusE
CAZyme Rep_185_c_1 Rep_185_c_1_2196 2643268 2645046 + GH66
STP Rep_185_c_1 Rep_185_c_1_2197 2645712 2647685 + HATPase_c
TC Rep_185_c_1 Rep_185_c_1_2198 2647796 2649754 - 2.A.67.4.2
CAZyme Rep_185_c_1 Rep_185_c_1_2199 2649822 2651096 - PL1
Gene ID: Rep_185_c_1_2192
Type: CAZyme
Location: 2634759 - 2636918 (+)
Gene ID: Rep_185_c_1_2193
Type: TC
Location: 2637234 - 2640239 (+)
Gene ID: Rep_185_c_1_2194
Type: TC
Location: 2640253 - 2641746 (+)
Gene ID: Rep_185_c_1_2195
Type: pfam
Location: 2641803 - 2643263 (+)
Gene ID: Rep_185_c_1_2196
Type: CAZyme
Location: 2643268 - 2645046 (+)
Gene ID: Rep_185_c_1_2197
Type: STP
Location: 2645712 - 2647685 (+)
Gene ID: Rep_185_c_1_2198
Type: TC
Location: 2647796 - 2649754 (-)
Gene ID: Rep_185_c_1_2199
Type: CAZyme
Location: 2649822 - 2651096 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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