dbCAN Logo

Cluster: Rep_185_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_185_c_1 Rep_185_c_1_158 190052 191170 + GT4
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_159 191246 192517 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_160 192543 193091 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_185_c_1 Rep_185_c_1_161 193084 193986 + GT2
CAZyme Rep_185_c_1 Rep_185_c_1_162 194013 194786 + GT2
pfam Rep_185_c_1 Rep_185_c_1_163 194779 195903 + NTP_transf_5
NULL(UNKNOWN) Rep_185_c_1 Rep_185_c_1_164 195982 197718 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_185_c_1 Rep_185_c_1_165 197855 199894 + 3.A.1.135.9
Gene ID: Rep_185_c_1_158
Type: CAZyme
Location: 190052 - 191170 (+)
Gene ID: Rep_185_c_1_159
Type:
Location: 191246 - 192517 (+)
Gene ID: Rep_185_c_1_160
Type:
Location: 192543 - 193091 (+)
Gene ID: Rep_185_c_1_161
Type: CAZyme
Location: 193084 - 193986 (+)
Gene ID: Rep_185_c_1_162
Type: CAZyme
Location: 194013 - 194786 (+)
Gene ID: Rep_185_c_1_163
Type: pfam
Location: 194779 - 195903 (+)
Gene ID: Rep_185_c_1_164
Type:
Location: 195982 - 197718 (+)
Gene ID: Rep_185_c_1_165
Type: TC
Location: 197855 - 199894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List