Cluster: Rep_185_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_185
- CGC Family ID: CGCFAM_00189
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_185_c_1 | Rep_185_c_1_150 | 179526 | 180260 | + | 1.B.18.3.3 |
| TC | Rep_185_c_1 | Rep_185_c_1_151 | 180304 | 182724 | + | 8.A.3.3.4 |
| pfam | Rep_185_c_1 | Rep_185_c_1_152 | 182740 | 184266 | + | Polysacc_synt |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_153 | 184266 | 185276 | + | GT2 |
| CAZyme | Rep_185_c_1 | Rep_185_c_1_154 | 185446 | 186573 | + | GT4 |
Gene ID: Rep_185_c_1_150
Type: TC
Location: 179526 - 180260 (+)
Type: TC
Location: 179526 - 180260 (+)
Gene ID: Rep_185_c_1_151
Type: TC
Location: 180304 - 182724 (+)
Type: TC
Location: 180304 - 182724 (+)
Gene ID: Rep_185_c_1_152
Type: pfam
Location: 182740 - 184266 (+)
Type: pfam
Location: 182740 - 184266 (+)
Gene ID: Rep_185_c_1_153
Type: CAZyme
Location: 184266 - 185276 (+)
Type: CAZyme
Location: 184266 - 185276 (+)
Gene ID: Rep_185_c_1_154
Type: CAZyme
Location: 185446 - 186573 (+)
Type: CAZyme
Location: 185446 - 186573 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.