Genome Details
Selected Rep_genome_ID: Rep_171
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GCA_021622805.1_ASM2162280v1_genomic | 3,203,669 | 96.63% | 0.74% | NA | Africa | H3AfricaPhase1 |
| MGYG000001806 | 3,097,082 | 91.24% | 0.06% | Denmark | Europe | UHGG |
| Rep_171 | 3,524,756 | 99.2593% | 0.37037% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_171_CGC8 | CGCFAM_00034 | Yes | 13 | 6 | |
| Rep_171_CGC6 | CGCFAM_00068 | Yes | 9 | 6 | |
| Rep_171_CGC33 | CGCFAM_00116 | Yes | 10 | 4 | xylan/beta-glucan |
| Rep_171_CGC17 | CGCFAM_00180 | Yes | 4 | 1 | |
| Rep_171_CGC18 | CGCFAM_00184 | Yes | 7 | 2 | |
| Rep_171_CGC40 | CGCFAM_00197 | Yes | 7 | 2 | |
| Rep_171_CGC35 | CGCFAM_00234 | Yes | 5 | 2 | |
| Rep_171_CGC20 | CGCFAM_00365 | Yes | 11 | 5 | host glycan |
| Rep_171_CGC15 | CGCFAM_01796 | Yes | 5 | 1 | |
| Rep_171_CGC4 | CGCFAM_04784 | Yes | 4 | 2 | |
| Rep_171_CGC32 | CGCFAM_06287 | Yes | 4 | 1 | |
| Rep_171_CGC25 | CGCFAM_07267 | Yes | 7 | 2 | |
| Rep_171_CGC9 | CGCFAM_09651 | Yes | 9 | 5 | |
| Rep_171_CGC27 | CGCFAM_11078 | Yes | 3 | 1 |
Top CAZyme Families