Cluster: Rep_171_CGC20
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: Rep_171
- CGC Family ID: CGCFAM_00365
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_171_c_1 | Rep_171_c_1_956 | 1312991 | 1315885 | - | GH2 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_957 | 1315972 | 1317918 | - | PL11_1 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_958 | 1317893 | 1318096 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_959 | 1318181 | 1319995 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_960 | 1321245 | 1325129 | - | PL11_2 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_961 | 1325239 | 1325415 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_171_c_1 | Rep_171_c_1_962 | 1325446 | 1328682 | + | 1.B.14.6.1 |
| TC | Rep_171_c_1 | Rep_171_c_1_963 | 1328734 | 1330407 | + | 8.A.46.1.3 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_964 | 1330376 | 1332868 | + | GH154 | GH88 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_965 | 1333477 | 1334277 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_966 | 1334277 | 1337294 | + | GH2 |
Gene ID: Rep_171_c_1_956
Type: CAZyme
Location: 1312991 - 1315885 (-)
Type: CAZyme
Location: 1312991 - 1315885 (-)
Gene ID: Rep_171_c_1_957
Type: CAZyme
Location: 1315972 - 1317918 (-)
Type: CAZyme
Location: 1315972 - 1317918 (-)
Gene ID: Rep_171_c_1_958
Type:
Location: 1317893 - 1318096 (-)
Type:
Location: 1317893 - 1318096 (-)
Gene ID: Rep_171_c_1_959
Type:
Location: 1318181 - 1319995 (-)
Type:
Location: 1318181 - 1319995 (-)
Gene ID: Rep_171_c_1_960
Type: CAZyme
Location: 1321245 - 1325129 (-)
Type: CAZyme
Location: 1321245 - 1325129 (-)
Gene ID: Rep_171_c_1_961
Type:
Location: 1325239 - 1325415 (+)
Type:
Location: 1325239 - 1325415 (+)
Gene ID: Rep_171_c_1_962
Type: TC
Location: 1325446 - 1328682 (+)
Type: TC
Location: 1325446 - 1328682 (+)
Gene ID: Rep_171_c_1_963
Type: TC
Location: 1328734 - 1330407 (+)
Type: TC
Location: 1328734 - 1330407 (+)
Gene ID: Rep_171_c_1_964
Type: CAZyme
Location: 1330376 - 1332868 (+)
Type: CAZyme
Location: 1330376 - 1332868 (+)
Gene ID: Rep_171_c_1_965
Type:
Location: 1333477 - 1334277 (+)
Type:
Location: 1333477 - 1334277 (+)
Gene ID: Rep_171_c_1_966
Type: CAZyme
Location: 1334277 - 1337294 (+)
Type: CAZyme
Location: 1334277 - 1337294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.