Cluster: Rep_171_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_171
- CGC Family ID: CGCFAM_00234
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_171_c_2 | Rep_171_c_2_475 | 584441 | 585433 | - | GT2 |
| CAZyme | Rep_171_c_2 | Rep_171_c_2_476 | 585388 | 586218 | - | GT2 |
| pfam | Rep_171_c_2 | Rep_171_c_2_477 | 586532 | 587989 | + | Polysacc_synt | Polysacc_synt_3 |
| pfam | Rep_171_c_2 | Rep_171_c_2_478 | 588141 | 590777 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| TC | Rep_171_c_2 | Rep_171_c_2_479 | 591499 | 591822 | + | 2.A.7.1.4 |
Gene ID: Rep_171_c_2_475
Type: CAZyme
Location: 584441 - 585433 (-)
Type: CAZyme
Location: 584441 - 585433 (-)
Gene ID: Rep_171_c_2_476
Type: CAZyme
Location: 585388 - 586218 (-)
Type: CAZyme
Location: 585388 - 586218 (-)
Gene ID: Rep_171_c_2_477
Type: pfam
Location: 586532 - 587989 (+)
Type: pfam
Location: 586532 - 587989 (+)
Gene ID: Rep_171_c_2_478
Type: pfam
Location: 588141 - 590777 (-)
Type: pfam
Location: 588141 - 590777 (-)
Gene ID: Rep_171_c_2_479
Type: TC
Location: 591499 - 591822 (+)
Type: TC
Location: 591499 - 591822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.