Cluster: Rep_171_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_171
- CGC Family ID: CGCFAM_00184
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_171_c_1 | Rep_171_c_1_820 | 1118770 | 1119975 | - | 2.A.1.7.17 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_821 | 1120114 | 1121886 | - | GH32 |
| pfam | Rep_171_c_1 | Rep_171_c_1_822 | 1122030 | 1122644 | - | DUF1573 | HYDIN_VesB_CFA65-like_Ig |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_823 | 1122634 | 1125000 | - | GH32 |
| pfam | Rep_171_c_1 | Rep_171_c_1_824 | 1125073 | 1127061 | - | DUF4960 | DUF4960 |
| TC | Rep_171_c_1 | Rep_171_c_1_825 | 1127089 | 1128777 | - | 8.A.46.1.5 |
| TC | Rep_171_c_1 | Rep_171_c_1_826 | 1128824 | 1131880 | - | 1.B.14.6.1 |
Gene ID: Rep_171_c_1_820
Type: TC
Location: 1118770 - 1119975 (-)
Type: TC
Location: 1118770 - 1119975 (-)
Gene ID: Rep_171_c_1_821
Type: CAZyme
Location: 1120114 - 1121886 (-)
Type: CAZyme
Location: 1120114 - 1121886 (-)
Gene ID: Rep_171_c_1_822
Type: pfam
Location: 1122030 - 1122644 (-)
Type: pfam
Location: 1122030 - 1122644 (-)
Gene ID: Rep_171_c_1_823
Type: CAZyme
Location: 1122634 - 1125000 (-)
Type: CAZyme
Location: 1122634 - 1125000 (-)
Gene ID: Rep_171_c_1_824
Type: pfam
Location: 1125073 - 1127061 (-)
Type: pfam
Location: 1125073 - 1127061 (-)
Gene ID: Rep_171_c_1_825
Type: TC
Location: 1127089 - 1128777 (-)
Type: TC
Location: 1127089 - 1128777 (-)
Gene ID: Rep_171_c_1_826
Type: TC
Location: 1128824 - 1131880 (-)
Type: TC
Location: 1128824 - 1131880 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.