Cluster: Rep_171_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_171
- CGC Family ID: CGCFAM_07267
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_171_c_1 | Rep_171_c_1_1384 | 1821996 | 1822523 | + | 2.A.51.1.6 |
| TC | Rep_171_c_1 | Rep_171_c_1_1385 | 1822762 | 1823337 | + | 2.A.51.1.6 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1386 | 1823435 | 1824421 | + | GH43_5 |
| CAZyme | Rep_171_c_1 | Rep_171_c_1_1387 | 1824764 | 1829254 | + | PL11 |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_1388 | 1829716 | 1832604 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_171_c_1 | Rep_171_c_1_1389 | 1832950 | 1835835 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_171_c_1 | Rep_171_c_1_1390 | 1835847 | 1839257 | + | 1.B.14.6.2 |
Gene ID: Rep_171_c_1_1384
Type: TC
Location: 1821996 - 1822523 (+)
Type: TC
Location: 1821996 - 1822523 (+)
Gene ID: Rep_171_c_1_1385
Type: TC
Location: 1822762 - 1823337 (+)
Type: TC
Location: 1822762 - 1823337 (+)
Gene ID: Rep_171_c_1_1386
Type: CAZyme
Location: 1823435 - 1824421 (+)
Type: CAZyme
Location: 1823435 - 1824421 (+)
Gene ID: Rep_171_c_1_1387
Type: CAZyme
Location: 1824764 - 1829254 (+)
Type: CAZyme
Location: 1824764 - 1829254 (+)
Gene ID: Rep_171_c_1_1388
Type:
Location: 1829716 - 1832604 (+)
Type:
Location: 1829716 - 1832604 (+)
Gene ID: Rep_171_c_1_1389
Type:
Location: 1832950 - 1835835 (+)
Type:
Location: 1832950 - 1835835 (+)
Gene ID: Rep_171_c_1_1390
Type: TC
Location: 1835847 - 1839257 (+)
Type: TC
Location: 1835847 - 1839257 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.