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Cluster: Rep_171_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_171_c_2 Rep_171_c_2_683 831057 831761 + 3.A.1.140.1
pfam Rep_171_c_2 Rep_171_c_2_684 831870 833186 + AA_kinase | ACT_9
pfam Rep_171_c_2 Rep_171_c_2_685 833222 834382 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme Rep_171_c_2 Rep_171_c_2_686 834386 835531 + GT2
pfam Rep_171_c_2 Rep_171_c_2_687 835572 836666 + Glyco_transf_4 | Glyco_trans_4_4
pfam Rep_171_c_2 Rep_171_c_2_688 836663 838651 + FBPase_2
CAZyme Rep_171_c_2 Rep_171_c_2_689 839283 840194 - GH73
Gene ID: Rep_171_c_2_683
Type: TC
Location: 831057 - 831761 (+)
Gene ID: Rep_171_c_2_684
Type: pfam
Location: 831870 - 833186 (+)
Gene ID: Rep_171_c_2_685
Type: pfam
Location: 833222 - 834382 (+)
Gene ID: Rep_171_c_2_686
Type: CAZyme
Location: 834386 - 835531 (+)
Gene ID: Rep_171_c_2_687
Type: pfam
Location: 835572 - 836666 (+)
Gene ID: Rep_171_c_2_688
Type: pfam
Location: 836663 - 838651 (+)
Gene ID: Rep_171_c_2_689
Type: CAZyme
Location: 839283 - 840194 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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