Genome Details
Selected Rep_genome_ID: Rep_169
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900545525
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG039_41 | 3,026,863 | 99.26% | 0.94% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0468 | 2,951,217 | 98.7% | 0.567% | United Republic of Tanzania | Africa | HRGM |
| MGYG000000852 | 2,918,004 | 94.81% | 0.94% | China | Asia | UHGG |
| Rep_169 | 3,083,083 | 99.1876% | 0.382318% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_169_CGC11 | CGCFAM_00005 | Yes | 8 | 4 | |
| Rep_169_CGC2 | CGCFAM_00034 | Yes | 12 | 5 | |
| Rep_169_CGC4 | CGCFAM_00070 | Yes | 9 | 4 | |
| Rep_169_CGC7 | CGCFAM_00072 | Yes | 3 | 2 | |
| Rep_169_CGC15 | CGCFAM_00136 | Yes | 9 | 1 | pectin |
| Rep_169_CGC8 | CGCFAM_00181 | Yes | 9 | 2 | |
| Rep_169_CGC1 | CGCFAM_00197 | Yes | 7 | 1 | |
| Rep_169_CGC28 | CGCFAM_00306 | Yes | 5 | 4 | |
| Rep_169_CGC14 | CGCFAM_00361 | Yes | 6 | 2 | |
| Rep_169_CGC5 | CGCFAM_00425 | Yes | 3 | 1 | |
| Rep_169_CGC22 | CGCFAM_00521 | Yes | 7 | 1 | |
| Rep_169_CGC12 | CGCFAM_00716 | Yes | 9 | 4 | alginate |
| Rep_169_CGC25 | CGCFAM_01075 | Yes | 20 | 10 | pectin |
| Rep_169_CGC32 | CGCFAM_01311 | Yes | 10 | 3 | |
| Rep_169_CGC16 | CGCFAM_02867 | Yes | 7 | 1 | |
| Rep_169_CGC27 | CGCFAM_03102 | Yes | 6 | 2 | |
| Rep_169_CGC24 | CGCFAM_04847 | Yes | 5 | 1 | |
| Rep_169_CGC9 | CGCFAM_11180 | Yes | 4 | 1 |
Top CAZyme Families