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Cluster: Rep_169_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_169_c_49 Rep_169_c_49_24 24068 25045 - GT2
CAZyme Rep_169_c_49 Rep_169_c_49_25 25009 25920 - GT2
pfam Rep_169_c_49 Rep_169_c_49_26 25965 27449 + Polysacc_synt | Polysacc_synt_3
TC Rep_169_c_49 Rep_169_c_49_27 27743 29149 + 2.A.62.1.1
pfam Rep_169_c_49 Rep_169_c_49_28 29186 30163 + PFK
TC Rep_169_c_49 Rep_169_c_49_29 30384 31910 + 3.A.2.1.2
pfam Rep_169_c_49 Rep_169_c_49_30 31932 32174 + ATP-synt_DE_N
NULL(UNKNOWN) Rep_169_c_49 Rep_169_c_49_31 32206 32622 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_169_c_49 Rep_169_c_49_32 32667 33689 + 3.A.2.1.7
Gene ID: Rep_169_c_49_24
Type: CAZyme
Location: 24068 - 25045 (-)
Gene ID: Rep_169_c_49_25
Type: CAZyme
Location: 25009 - 25920 (-)
Gene ID: Rep_169_c_49_26
Type: pfam
Location: 25965 - 27449 (+)
Gene ID: Rep_169_c_49_27
Type: TC
Location: 27743 - 29149 (+)
Gene ID: Rep_169_c_49_28
Type: pfam
Location: 29186 - 30163 (+)
Gene ID: Rep_169_c_49_29
Type: TC
Location: 30384 - 31910 (+)
Gene ID: Rep_169_c_49_30
Type: pfam
Location: 31932 - 32174 (+)
Gene ID: Rep_169_c_49_31
Type:
Location: 32206 - 32622 (+)
Gene ID: Rep_169_c_49_32
Type: TC
Location: 32667 - 33689 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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