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Cluster: Rep_169_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_169_c_222 Rep_169_c_222_1 126 929 + GT11
CAZyme Rep_169_c_222 Rep_169_c_222_2 933 1868 - GT2
NULL(UNKNOWN) Rep_169_c_222 Rep_169_c_222_3 1865 3280 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_169_c_222 Rep_169_c_222_4 3293 5401 - Reg_prop | PorZ_N_b_propeller
CAZyme Rep_169_c_222 Rep_169_c_222_5 5398 6300 - GT2
sulfatase Rep_169_c_222 Rep_169_c_222_6 6297 6911 - S1_7
TC Rep_169_c_222 Rep_169_c_222_7 6877 7860 - 2.A.115.1.5
pfam Rep_169_c_222 Rep_169_c_222_8 7872 10775 - tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
pfam Rep_169_c_222 Rep_169_c_222_9 11046 12368 + OEP | OEP
TC Rep_169_c_222 Rep_169_c_222_10 12389 13420 + 8.A.1.1.2
Gene ID: Rep_169_c_222_1
Type: CAZyme
Location: 126 - 929 (+)
Gene ID: Rep_169_c_222_2
Type: CAZyme
Location: 933 - 1868 (-)
Gene ID: Rep_169_c_222_3
Type:
Location: 1865 - 3280 (-)
Gene ID: Rep_169_c_222_4
Type: pfam
Location: 3293 - 5401 (-)
Gene ID: Rep_169_c_222_5
Type: CAZyme
Location: 5398 - 6300 (-)
Gene ID: Rep_169_c_222_6
Type: sulfatase
Location: 6297 - 6911 (-)
Gene ID: Rep_169_c_222_7
Type: TC
Location: 6877 - 7860 (-)
Gene ID: Rep_169_c_222_8
Type: pfam
Location: 7872 - 10775 (-)
Gene ID: Rep_169_c_222_9
Type: pfam
Location: 11046 - 12368 (+)
Gene ID: Rep_169_c_222_10
Type: TC
Location: 12389 - 13420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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