PROTEIN: Rep_169_c_222_3
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Protein File & Metadata
Source:
Rep_169_c_222_3.pdb
Genome ID:
Protein ID:
Rep_169_c_222_3
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Protein Sequence
MKEYIYKHPA LCLILITMPL MLWGKLLILP TFDDWSTLSS PNYDPDFIKY ILPYGYIWRP 60 FDAIMGYIVA MDCRLFPKLN HLIIFAGHIT NVFLLYRICK KVRLGKAAAN IAAIYFYLSP 120 CMLATVFSCD SLNQTYSQLW GLATILAYLS LEGKAKYTIW TVTIFMAALA KDNGIAFAVI 180 PPVVAFAFGM ADRKTLVRHF MFGILIAVVY AAIRLSLPAT YIENTDYSTF DPNRKVKEII 240 MLLGYSLSAT DYISLLHAPS RNLTLAAVTF LASFPFIYLT LIRNIRIWKD NTFLLIILCT 300 LIALSPNLLI SLTIMNTYAG LGMVSLLIGY AVEKNKWKGK MLNTAFILYV VTAIIVDCHH 360 WYMSYSTSLT GREMALQAIR KTGSPAEKVY VIIIEDDYPR FSSFCVVPSD AFGWGLSAKY 420 ENRYKWPQEM SDTTIVRKDS IQAEEIRKKA FAKGFDCVWT VNRKEVSVER R 471
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 2 | 471 | 15 | 507 | 0.6889 |
0.7405 |
| AF-Q9CC27-F1-model_v4 | 5 | 471 | 28 | 527 | 0.6765 |
0.7388 |
| AF-I6Y460-F1-model_v4 | 3 | 471 | 6 | 591 | 0.6757 |
0.7687 |
| AF-O06152-F1-model_v4 | 3 | 471 | 53 | 556 | 0.6583 |
0.733 |
| AF-Q7AQM1-F1-model_v4 | 21 | 471 | 1 | 569 | 0.6578 |
0.7628 |
| AF-G5EDN2-F1-model_v4 | 4 | 471 | 2 | 495 | 0.6493 |
0.6912 |
| AF-Q7SXZ1-F1-model_v4 | 1 | 471 | 36 | 527 | 0.6345 |
0.6929 |
| AF-A0A0R0KMM9-F1-model_v4 | 1 | 471 | 4 | 485 | 0.6316 |
0.672 |
| AF-A0A0K0EAE5-F1-model_v4 | 4 | 471 | 2 | 491 | 0.6311 |
0.6719 |
| AF-A0A1D6E4B0-F1-model_v4 | 1 | 471 | 7 | 502 | 0.6242 |
0.6736 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6P1FL66-F1-model_v4 | GT83 | 2 | 471 | 1 | 464 | 0.7206 |
0.7504 |
| AF-A0A169C2H1-F1-model_v4 | GT83 | 2 | 471 | 1 | 464 | 0.7199 |
0.75 |
| A0A543NUS7 | GT83 | 7 | 471 | 1 | 475 | 0.7185 |
0.7522 |
| A0A0D5CKI4 | GT83 | 8 | 471 | 1 | 476 | 0.7168 |
0.7513 |
| AF-A0A0D5CKI4-F1-model_v4 | GT83 | 8 | 471 | 1 | 476 | 0.7168 |
0.7513 |
| AF-A0A6P1J975-F1-model_v4 | GT83 | 1 | 471 | 1 | 481 | 0.7146 |
0.745 |
| AF-A0A2H5B4C4-F1-model_v4 | GT83 | 1 | 471 | 1 | 486 | 0.714 |
0.7493 |
| AF-A0A7I7PDW5-F1-model_v4 | GT83 | 4 | 471 | 2 | 472 | 0.7132 |
0.7412 |
| AF-A0A6P1F1U1-F1-model_v4 | GT83 | 1 | 471 | 15 | 487 | 0.7129 |
0.746 |
| AF-A0A7I7TYV7-F1-model_v4 | GT83 | 6 | 471 | 9 | 479 | 0.7116 |
0.7496 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A543NUS7 | GT83 | 7 | 471 | 1 | 475 | 0.7185 |
0.7522 |
| A0A0D5CKI4 | GT83 | 8 | 471 | 1 | 476 | 0.7168 |
0.7513 |
| A0A316B179 | GT83 | 2 | 471 | 15 | 486 | 0.7105 |
0.744 |
| A0A1S9M996 | GT83 | 18 | 471 | 1 | 476 | 0.7087 |
0.7601 |
| A0A7D3ZKU3 | GT83 | 11 | 471 | 1 | 460 | 0.7073 |
0.7364 |
| A0A919H1R8 | GT83 | 1 | 471 | 1 | 481 | 0.706 |
0.7406 |
| UFS57809.1 | GT83 | 4 | 471 | 13 | 480 | 0.7051 |
0.7386 |
| A0A387BP67 | GT83 | 4 | 471 | 1 | 472 | 0.7045 |
0.7349 |
| Q1IJH5 | GT83 | 6 | 470 | 16 | 482 | 0.7028 |
0.74 |
| A0A7T4WKG0 | GT83 | 3 | 471 | 11 | 488 | 0.7011 |
0.7377 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 5 | 471 | 1 | 466 | 0.6722 |
0.703 |
| AF-Q6CAB8-F1-model_v4 | 7 | 469 | 12 | 510 | 0.6406 |
0.6956 |
| AF-Q7SXZ1-F1-model_v4 | 1 | 471 | 36 | 527 | 0.6345 |
0.6929 |
| AF-Q6BH65-F1-model_v4 | 2 | 470 | 33 | 549 | 0.6252 |
0.6931 |
| AF-Q8MT80-F1-model_v4 | 1 | 471 | 6 | 676 | 0.5842 |
0.7069 |