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Cluster: Rep_169_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_169_c_82 Rep_169_c_82_7 8120 9385 + GT2
pfam Rep_169_c_82 Rep_169_c_82_8 9401 10567 + EpsG
CAZyme Rep_169_c_82 Rep_169_c_82_9 10564 11730 + GT4
pfam Rep_169_c_82 Rep_169_c_82_10 11727 12812 + Glyco_tran_WbsX
CAZyme Rep_169_c_82 Rep_169_c_82_11 12817 13884 + GT4
CAZyme Rep_169_c_82 Rep_169_c_82_12 13881 14636 + GT2
TC Rep_169_c_82 Rep_169_c_82_13 15107 16207 + 9.B.146.1.4
TC Rep_169_c_82 Rep_169_c_82_14 16207 16779 + 9.B.18.1.3
Gene ID: Rep_169_c_82_7
Type: CAZyme
Location: 8120 - 9385 (+)
Gene ID: Rep_169_c_82_8
Type: pfam
Location: 9401 - 10567 (+)
Gene ID: Rep_169_c_82_9
Type: CAZyme
Location: 10564 - 11730 (+)
Gene ID: Rep_169_c_82_10
Type: pfam
Location: 11727 - 12812 (+)
Gene ID: Rep_169_c_82_11
Type: CAZyme
Location: 12817 - 13884 (+)
Gene ID: Rep_169_c_82_12
Type: CAZyme
Location: 13881 - 14636 (+)
Gene ID: Rep_169_c_82_13
Type: TC
Location: 15107 - 16207 (+)
Gene ID: Rep_169_c_82_14
Type: TC
Location: 16207 - 16779 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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