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Cluster: Rep_169_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_169_c_104 Rep_169_c_104_2 1571 2770 + 2.A.6.2.4
TC Rep_169_c_104 Rep_169_c_104_3 2795 5992 + 2.A.6.2.22
TC Rep_169_c_104 Rep_169_c_104_4 5994 7382 + 1.B.17.3.6
pfam Rep_169_c_104 Rep_169_c_104_5 7421 8194 + Hexapep | Acetyltransf_11
NULL(UNKNOWN) Rep_169_c_104 Rep_169_c_104_6 8525 9259 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_169_c_104 Rep_169_c_104_7 9760 14484 - CE8 | PL1_2
NULL(UNKNOWN) Rep_169_c_104 Rep_169_c_104_8 15505 16602 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_169_c_104 Rep_169_c_104_9 16702 18507 - SusD_RagB | SusD-like_3
TC Rep_169_c_104 Rep_169_c_104_10 18548 21484 - 1.B.14.6.1
Gene ID: Rep_169_c_104_2
Type: TC
Location: 1571 - 2770 (+)
Gene ID: Rep_169_c_104_3
Type: TC
Location: 2795 - 5992 (+)
Gene ID: Rep_169_c_104_4
Type: TC
Location: 5994 - 7382 (+)
Gene ID: Rep_169_c_104_5
Type: pfam
Location: 7421 - 8194 (+)
Gene ID: Rep_169_c_104_6
Type:
Location: 8525 - 9259 (-)
Gene ID: Rep_169_c_104_7
Type: CAZyme
Location: 9760 - 14484 (-)
Gene ID: Rep_169_c_104_8
Type:
Location: 15505 - 16602 (-)
Gene ID: Rep_169_c_104_9
Type: pfam
Location: 16702 - 18507 (-)
Gene ID: Rep_169_c_104_10
Type: TC
Location: 18548 - 21484 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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