Cluster: Rep_169_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_169
- CGC Family ID: CGCFAM_02867
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_169_c_107 | Rep_169_c_107_15 | 17173 | 18420 | - | 3.A.1.122.1 |
| TC | Rep_169_c_107 | Rep_169_c_107_16 | 18441 | 19700 | - | 3.A.1.122.2 |
| TC | Rep_169_c_107 | Rep_169_c_107_17 | 19709 | 20428 | - | 3.A.1.122.14 |
| TF | Rep_169_c_107 | Rep_169_c_107_18 | 20440 | 20823 | - | GntR |
| NULL(UNKNOWN) | Rep_169_c_107 | Rep_169_c_107_19 | 20820 | 21620 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_169_c_107 | Rep_169_c_107_20 | 21670 | 22491 | - | 3.A.1.132.6 |
| CAZyme | Rep_169_c_107 | Rep_169_c_107_21 | 23006 | 25876 | - | CBM77 | PL1 |
Gene ID: Rep_169_c_107_15
Type: TC
Location: 17173 - 18420 (-)
Type: TC
Location: 17173 - 18420 (-)
Gene ID: Rep_169_c_107_16
Type: TC
Location: 18441 - 19700 (-)
Type: TC
Location: 18441 - 19700 (-)
Gene ID: Rep_169_c_107_17
Type: TC
Location: 19709 - 20428 (-)
Type: TC
Location: 19709 - 20428 (-)
Gene ID: Rep_169_c_107_18
Type: TF
Location: 20440 - 20823 (-)
Type: TF
Location: 20440 - 20823 (-)
Gene ID: Rep_169_c_107_19
Type:
Location: 20820 - 21620 (-)
Type:
Location: 20820 - 21620 (-)
Gene ID: Rep_169_c_107_20
Type: TC
Location: 21670 - 22491 (-)
Type: TC
Location: 21670 - 22491 (-)
Gene ID: Rep_169_c_107_21
Type: CAZyme
Location: 23006 - 25876 (-)
Type: CAZyme
Location: 23006 - 25876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900545525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.