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Cluster: Rep_169_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_169_c_37 Rep_169_c_37_8 7284 8600 - 2.A.50.2.1
NULL(UNKNOWN) Rep_169_c_37 Rep_169_c_37_9 8722 9972 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_169_c_37 Rep_169_c_37_10 9979 11211 - Glyco_trans_1_4
CAZyme Rep_169_c_37 Rep_169_c_37_11 11215 12120 - GT2
pfam Rep_169_c_37 Rep_169_c_37_12 12144 13634 - DUF6056
CAZyme Rep_169_c_37 Rep_169_c_37_13 13695 14573 - GT2
pfam Rep_169_c_37 Rep_169_c_37_14 14592 14978 - GtrA_DPMS_TM
CAZyme Rep_169_c_37 Rep_169_c_37_15 14959 16209 - GT4
CAZyme Rep_169_c_37 Rep_169_c_37_16 16222 17010 - GT2
Gene ID: Rep_169_c_37_8
Type: TC
Location: 7284 - 8600 (-)
Gene ID: Rep_169_c_37_9
Type:
Location: 8722 - 9972 (-)
Gene ID: Rep_169_c_37_10
Type: pfam
Location: 9979 - 11211 (-)
Gene ID: Rep_169_c_37_11
Type: CAZyme
Location: 11215 - 12120 (-)
Gene ID: Rep_169_c_37_12
Type: pfam
Location: 12144 - 13634 (-)
Gene ID: Rep_169_c_37_13
Type: CAZyme
Location: 13695 - 14573 (-)
Gene ID: Rep_169_c_37_14
Type: pfam
Location: 14592 - 14978 (-)
Gene ID: Rep_169_c_37_15
Type: CAZyme
Location: 14959 - 16209 (-)
Gene ID: Rep_169_c_37_16
Type: CAZyme
Location: 16222 - 17010 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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