Genome Details
Selected Rep_genome_ID: Rep_166
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_166 | 3,466,395 | 97.4691% | 0.617284% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_166_CGC10 | CGCFAM_00001 | Yes | 16 | 7 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_166_CGC14 | CGCFAM_00001 | Yes | 8 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_166_CGC22 | CGCFAM_00034 | Yes | 5 | 1 | |
| Rep_166_CGC6 | CGCFAM_00044 | Yes | 8 | 2 | beta-mannan/xylan/beta-glucan |
| Rep_166_CGC35 | CGCFAM_00068 | Yes | 6 | 3 | |
| Rep_166_CGC1 | CGCFAM_00071 | Yes | 3 | 2 | |
| Rep_166_CGC27 | CGCFAM_00081 | Yes | 11 | 1 | |
| Rep_166_CGC29 | CGCFAM_00116 | Yes | 7 | 2 | xylan/beta-glucan |
| Rep_166_CGC23 | CGCFAM_00146 | Yes | 4 | 2 | |
| Rep_166_CGC38 | CGCFAM_00310 | Yes | 13 | 2 | |
| Rep_166_CGC32 | CGCFAM_00333 | Yes | 4 | 1 | beta-mannan |
| Rep_166_CGC17 | CGCFAM_00445 | Yes | 4 | 2 | |
| Rep_166_CGC20 | CGCFAM_00996 | Yes | 3 | 1 | |
| Rep_166_CGC36 | CGCFAM_01877 | Yes | 4 | 3 | |
| Rep_166_CGC19 | CGCFAM_03324 | Yes | 6 | 3 | |
| Rep_166_CGC2 | CGCFAM_04141 | Yes | 8 | 5 | |
| Rep_166_CGC30 | CGCFAM_04442 | Yes | 4 | 1 | |
| Rep_166_CGC9 | CGCFAM_04639 | Yes | 7 | 3 | |
| Rep_166_CGC34 | CGCFAM_04640 | Yes | 6 | 2 | |
| Rep_166_CGC15 | CGCFAM_11213 | Yes | 9 | 1 |
Top CAZyme Families