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Cluster: Rep_166_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_166_c_33 Rep_166_c_33_7 6893 8860 + 2.A.67.4.2
CAZyme Rep_166_c_33 Rep_166_c_33_8 9225 11636 - GH10
pfam Rep_166_c_33 Rep_166_c_33_9 11676 13043 - SGBP_B_XBD
pfam Rep_166_c_33 Rep_166_c_33_10 13122 14864 - SusD_RagB | SusD-like_3
TC Rep_166_c_33 Rep_166_c_33_11 14906 18079 - 1.B.14.6.1
NULL(UNKNOWN) Rep_166_c_33 Rep_166_c_33_12 18441 18587 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_166_c_33 Rep_166_c_33_13 18820 22689 - HTH_AraC | HTH_AraC
CAZyme Rep_166_c_33 Rep_166_c_33_14 22730 24454 - GH35
Gene ID: Rep_166_c_33_7
Type: TC
Location: 6893 - 8860 (+)
Gene ID: Rep_166_c_33_8
Type: CAZyme
Location: 9225 - 11636 (-)
Gene ID: Rep_166_c_33_9
Type: pfam
Location: 11676 - 13043 (-)
Gene ID: Rep_166_c_33_10
Type: pfam
Location: 13122 - 14864 (-)
Gene ID: Rep_166_c_33_11
Type: TC
Location: 14906 - 18079 (-)
Gene ID: Rep_166_c_33_12
Type:
Location: 18441 - 18587 (+)
Gene ID: Rep_166_c_33_13
Type: TF
Location: 18820 - 22689 (-)
Gene ID: Rep_166_c_33_14
Type: CAZyme
Location: 22730 - 24454 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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