Cluster: Rep_166_CGC38
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_166
- CGC Family ID: CGCFAM_00310
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_166_c_272 | Rep_166_c_272_8 | 5772 | 6797 | - | 3.A.2.1.7 |
| NULL(UNKNOWN) | Rep_166_c_272 | Rep_166_c_272_9 | 6863 | 7261 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_166_c_272 | Rep_166_c_272_10 | 7327 | 7572 | - | ATP-synt_DE_N |
| TC | Rep_166_c_272 | Rep_166_c_272_11 | 7590 | 9119 | - | 3.A.2.1.7 |
| pfam | Rep_166_c_272 | Rep_166_c_272_12 | 9324 | 10301 | - | PFK |
| TC | Rep_166_c_272 | Rep_166_c_272_13 | 10341 | 11750 | - | 2.A.62.1.3 |
| pfam | Rep_166_c_272 | Rep_166_c_272_14 | 11898 | 12536 | + | LUD_dom |
| CAZyme | Rep_166_c_272 | Rep_166_c_272_15 | 12542 | 13705 | - | GT2 |
| NULL(UNKNOWN) | Rep_166_c_272 | Rep_166_c_272_16 | 13689 | 14078 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_166_c_272 | Rep_166_c_272_17 | 14256 | 14876 | - | Toprim | RecR_ZnF | Toprim_4 | RecR_C | RecR_HhH |
| TC | Rep_166_c_272 | Rep_166_c_272_18 | 14888 | 16684 | - | 3.A.1.120.6 |
| pfam | Rep_166_c_272 | Rep_166_c_272_19 | 16690 | 17286 | - | MMR_HSR1 | FeoB_N |
| CAZyme | Rep_166_c_272 | Rep_166_c_272_20 | 17471 | 18838 | - | GH175 |
Gene ID: Rep_166_c_272_8
Type: TC
Location: 5772 - 6797 (-)
Type: TC
Location: 5772 - 6797 (-)
Gene ID: Rep_166_c_272_9
Type:
Location: 6863 - 7261 (-)
Type:
Location: 6863 - 7261 (-)
Gene ID: Rep_166_c_272_10
Type: pfam
Location: 7327 - 7572 (-)
Type: pfam
Location: 7327 - 7572 (-)
Gene ID: Rep_166_c_272_11
Type: TC
Location: 7590 - 9119 (-)
Type: TC
Location: 7590 - 9119 (-)
Gene ID: Rep_166_c_272_12
Type: pfam
Location: 9324 - 10301 (-)
Type: pfam
Location: 9324 - 10301 (-)
Gene ID: Rep_166_c_272_13
Type: TC
Location: 10341 - 11750 (-)
Type: TC
Location: 10341 - 11750 (-)
Gene ID: Rep_166_c_272_14
Type: pfam
Location: 11898 - 12536 (+)
Type: pfam
Location: 11898 - 12536 (+)
Gene ID: Rep_166_c_272_15
Type: CAZyme
Location: 12542 - 13705 (-)
Type: CAZyme
Location: 12542 - 13705 (-)
Gene ID: Rep_166_c_272_16
Type:
Location: 13689 - 14078 (-)
Type:
Location: 13689 - 14078 (-)
Gene ID: Rep_166_c_272_17
Type: pfam
Location: 14256 - 14876 (-)
Type: pfam
Location: 14256 - 14876 (-)
Gene ID: Rep_166_c_272_18
Type: TC
Location: 14888 - 16684 (-)
Type: TC
Location: 14888 - 16684 (-)
Gene ID: Rep_166_c_272_19
Type: pfam
Location: 16690 - 17286 (-)
Type: pfam
Location: 16690 - 17286 (-)
Gene ID: Rep_166_c_272_20
Type: CAZyme
Location: 17471 - 18838 (-)
Type: CAZyme
Location: 17471 - 18838 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.