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Cluster: Rep_166_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_166_c_184 Rep_166_c_184_14 10241 10924 - GH25
peptidase Rep_166_c_184 Rep_166_c_184_15 11033 12223 + C11.UPW
TC Rep_166_c_184 Rep_166_c_184_16 12536 12886 + 3.D.1.8.1
TC Rep_166_c_184 Rep_166_c_184_17 12877 13536 + 3.D.1.3.1
TC Rep_166_c_184 Rep_166_c_184_18 13561 15123 + 3.D.1.5.1
TC Rep_166_c_184 Rep_166_c_184_19 15301 16386 + 3.D.1.5.1
STP Rep_166_c_184 Rep_166_c_184_20 16419 16943 + Fer4 | Fer4
TC Rep_166_c_184 Rep_166_c_184_21 16959 17483 + 3.D.9.1.1
TC Rep_166_c_184 Rep_166_c_184_22 17507 17794 + 3.D.1.8.1
TC Rep_166_c_184 Rep_166_c_184_23 17804 19843 + 3.D.9.1.1
TC Rep_166_c_184 Rep_166_c_184_24 19883 21370 + 3.D.1.5.1
Gene ID: Rep_166_c_184_14
Type: CAZyme
Location: 10241 - 10924 (-)
Gene ID: Rep_166_c_184_15
Type: peptidase
Location: 11033 - 12223 (+)
Gene ID: Rep_166_c_184_16
Type: TC
Location: 12536 - 12886 (+)
Gene ID: Rep_166_c_184_17
Type: TC
Location: 12877 - 13536 (+)
Gene ID: Rep_166_c_184_18
Type: TC
Location: 13561 - 15123 (+)
Gene ID: Rep_166_c_184_19
Type: TC
Location: 15301 - 16386 (+)
Gene ID: Rep_166_c_184_20
Type: STP
Location: 16419 - 16943 (+)
Gene ID: Rep_166_c_184_21
Type: TC
Location: 16959 - 17483 (+)
Gene ID: Rep_166_c_184_22
Type: TC
Location: 17507 - 17794 (+)
Gene ID: Rep_166_c_184_23
Type: TC
Location: 17804 - 19843 (+)
Gene ID: Rep_166_c_184_24
Type: TC
Location: 19883 - 21370 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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