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Cluster: Rep_166_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_166_c_68 Rep_166_c_68_3 1235 2158 + 3.D.6.1.2
TC Rep_166_c_68 Rep_166_c_68_4 2163 3512 + 3.D.6.1.2
TC Rep_166_c_68 Rep_166_c_68_5 3536 4540 + 3.D.6.1.2
TC Rep_166_c_68 Rep_166_c_68_6 4537 5166 + 3.D.6.1.2
TC Rep_166_c_68 Rep_166_c_68_7 5193 5774 + 3.D.6.1.2
TC Rep_166_c_68 Rep_166_c_68_8 5781 6383 + 3.D.6.1.2
CAZyme Rep_166_c_68 Rep_166_c_68_9 6539 8158 - GH29
TF Rep_166_c_68 Rep_166_c_68_10 8501 9358 + HTH_AraC | HTH_AraC
TC Rep_166_c_68 Rep_166_c_68_11 9432 12314 - 2.A.6.3.2
Gene ID: Rep_166_c_68_3
Type: TC
Location: 1235 - 2158 (+)
Gene ID: Rep_166_c_68_4
Type: TC
Location: 2163 - 3512 (+)
Gene ID: Rep_166_c_68_5
Type: TC
Location: 3536 - 4540 (+)
Gene ID: Rep_166_c_68_6
Type: TC
Location: 4537 - 5166 (+)
Gene ID: Rep_166_c_68_7
Type: TC
Location: 5193 - 5774 (+)
Gene ID: Rep_166_c_68_8
Type: TC
Location: 5781 - 6383 (+)
Gene ID: Rep_166_c_68_9
Type: CAZyme
Location: 6539 - 8158 (-)
Gene ID: Rep_166_c_68_10
Type: TF
Location: 8501 - 9358 (+)
Gene ID: Rep_166_c_68_11
Type: TC
Location: 9432 - 12314 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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