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Cluster: Rep_166_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_166_c_67 Rep_166_c_67_9 9407 12349 + 1.B.14.6.1
pfam Rep_166_c_67 Rep_166_c_67_10 12395 13987 + SusD_RagB | SusD-like_3
CAZyme Rep_166_c_67 Rep_166_c_67_11 14135 15337 + GH99
CAZyme Rep_166_c_67 Rep_166_c_67_12 15447 17465 + GH97
NULL(UNKNOWN) Rep_166_c_67 Rep_166_c_67_13 17478 17621 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_166_c_67 Rep_166_c_67_14 17660 18235 + QueH
CAZyme Rep_166_c_67 Rep_166_c_67_15 18275 19615 - GH28
CAZyme Rep_166_c_67 Rep_166_c_67_16 19684 21918 - GH106
Gene ID: Rep_166_c_67_9
Type: TC
Location: 9407 - 12349 (+)
Gene ID: Rep_166_c_67_10
Type: pfam
Location: 12395 - 13987 (+)
Gene ID: Rep_166_c_67_11
Type: CAZyme
Location: 14135 - 15337 (+)
Gene ID: Rep_166_c_67_12
Type: CAZyme
Location: 15447 - 17465 (+)
Gene ID: Rep_166_c_67_13
Type:
Location: 17478 - 17621 (-)
Gene ID: Rep_166_c_67_14
Type: pfam
Location: 17660 - 18235 (+)
Gene ID: Rep_166_c_67_15
Type: CAZyme
Location: 18275 - 19615 (-)
Gene ID: Rep_166_c_67_16
Type: CAZyme
Location: 19684 - 21918 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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