Genome Details
Selected Rep_genome_ID: MGYG000002560
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000002560 | 5,390,440 | 97.96% | 0.37% | China | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000002560_CGC40 | CGCFAM_01475 | Yes | 19 | 11 | pectin |
| MGYG000002560_CGC13 | CGCFAM_01491 | Yes | 12 | 5 | |
| MGYG000002560_CGC74 | CGCFAM_01809 | Yes | 6 | 4 | pectin |
| MGYG000002560_CGC11 | CGCFAM_01814 | Yes | 9 | 4 | |
| MGYG000002560_CGC21 | CGCFAM_02545 | Yes | 12 | 1 | |
| MGYG000002560_CGC4 | CGCFAM_02587 | Yes | 5 | 2 | |
| MGYG000002560_CGC28 | CGCFAM_02719 | Yes | 4 | 1 | |
| MGYG000002560_CGC5 | CGCFAM_02873 | Yes | 3 | 1 | |
| MGYG000002560_CGC6 | CGCFAM_02933 | Yes | 12 | 4 | host glycan |
| MGYG000002560_CGC71 | CGCFAM_03627 | Yes | 12 | 1 | |
| MGYG000002560_CGC7 | CGCFAM_03628 | Yes | 28 | 10 | |
| MGYG000002560_CGC38 | CGCFAM_03629 | Yes | 5 | 1 | |
| MGYG000002560_CGC31 | CGCFAM_04269 | Yes | 5 | 2 | |
| MGYG000002560_CGC32 | CGCFAM_04495 | Yes | 5 | 2 | |
| MGYG000002560_CGC44 | CGCFAM_05200 | Yes | 31 | 13 | |
| MGYG000002560_CGC10 | CGCFAM_05201 | Yes | 13 | 3 | |
| MGYG000002560_CGC23 | CGCFAM_06593 | Yes | 12 | 4 | |
| MGYG000002560_CGC65 | CGCFAM_07916 | Yes | 11 | 5 | |
| MGYG000002560_CGC47 | CGCFAM_09200 | Yes | 6 | 1 |
Top CAZyme Families