Cluster: MGYG000002560_CGC65
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_07916
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_30 | MGYG000002560_30_25 | 29222 | 31585 | - | GH146 |
| CAZyme | MGYG000002560_30 | MGYG000002560_30_26 | 31593 | 33941 | - | GH35 |
| CAZyme | MGYG000002560_30 | MGYG000002560_30_27 | 34094 | 36616 | - | GH51_2 |
| CAZyme | MGYG000002560_30 | MGYG000002560_30_28 | 36654 | 38597 | - | GH43_19 | GH43_34 |
| pfam | MGYG000002560_30 | MGYG000002560_30_29 | 38756 | 40897 | + | HRDC | PIF1 | AAA_19 | AAA_22 | AAA_30 |
| TC | MGYG000002560_30 | MGYG000002560_30_30 | 41315 | 44389 | + | 1.B.14.6.1 |
| pfam | MGYG000002560_30 | MGYG000002560_30_31 | 44403 | 45956 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000002560_30 | MGYG000002560_30_32 | 46971 | 48128 | - | GH43_24 |
| NULL(UNKNOWN) | MGYG000002560_30 | MGYG000002560_30_33 | 48190 | 48285 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002560_30 | MGYG000002560_30_34 | 48307 | 50082 | - | 8.A.46.1.6 |
| TC | MGYG000002560_30 | MGYG000002560_30_35 | 50103 | 53225 | - | 1.B.14.6.1 |
Gene ID: MGYG000002560_30_25
Type: CAZyme
Location: 29222 - 31585 (-)
Type: CAZyme
Location: 29222 - 31585 (-)
Gene ID: MGYG000002560_30_26
Type: CAZyme
Location: 31593 - 33941 (-)
Type: CAZyme
Location: 31593 - 33941 (-)
Gene ID: MGYG000002560_30_27
Type: CAZyme
Location: 34094 - 36616 (-)
Type: CAZyme
Location: 34094 - 36616 (-)
Gene ID: MGYG000002560_30_28
Type: CAZyme
Location: 36654 - 38597 (-)
Type: CAZyme
Location: 36654 - 38597 (-)
Gene ID: MGYG000002560_30_29
Type: pfam
Location: 38756 - 40897 (+)
Type: pfam
Location: 38756 - 40897 (+)
Gene ID: MGYG000002560_30_30
Type: TC
Location: 41315 - 44389 (+)
Type: TC
Location: 41315 - 44389 (+)
Gene ID: MGYG000002560_30_31
Type: pfam
Location: 44403 - 45956 (+)
Type: pfam
Location: 44403 - 45956 (+)
Gene ID: MGYG000002560_30_32
Type: CAZyme
Location: 46971 - 48128 (-)
Type: CAZyme
Location: 46971 - 48128 (-)
Gene ID: MGYG000002560_30_33
Type:
Location: 48190 - 48285 (-)
Type:
Location: 48190 - 48285 (-)
Gene ID: MGYG000002560_30_34
Type: TC
Location: 48307 - 50082 (-)
Type: TC
Location: 48307 - 50082 (-)
Gene ID: MGYG000002560_30_35
Type: TC
Location: 50103 - 53225 (-)
Type: TC
Location: 50103 - 53225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.