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Genome Details

Selected Rep_genome_ID: MGYG000002560
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola sp902388365
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
MGYG000002560 5,390,440 97.96% 0.37% China Asia UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
MGYG000002560_CGC15 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
MGYG000002560_CGC30 CGCFAM_00006 Yes 12 8
MGYG000002560_CGC57 CGCFAM_00015 Yes 9 5
MGYG000002560_CGC53 CGCFAM_00048 Yes 14 2
MGYG000002560_CGC55 CGCFAM_00061 Yes 5 2
MGYG000002560_CGC16 CGCFAM_00079 Yes 5 3 pectin
MGYG000002560_CGC62 CGCFAM_00110 Yes 7 3 pectin/host glycan
MGYG000002560_CGC2 CGCFAM_00151 Yes 5 3
MGYG000002560_CGC43 CGCFAM_00158 Yes 10 2
MGYG000002560_CGC48 CGCFAM_00194 Yes 13 9 host glycan
PUL0091_MGYG000002560_C3 CGCFAM_00194 Yes 8 7 host glycan
PUL0092_MGYG000002560_C1 CGCFAM_00194 Yes 10 5 host glycan
PUL0721_MGYG000002560_C2 CGCFAM_00194 Yes 13 9 host glycan
MGYG000002560_CGC17 CGCFAM_00225 Yes 5 3 arabinogalactan
MGYG000002560_CGC60 CGCFAM_00238 Yes 11 6 xylan
MGYG000002560_CGC12 CGCFAM_00265 Yes 11 3 beta-glucan
MGYG000002560_CGC67 CGCFAM_00368 Yes 5 1
MGYG000002560_CGC27 CGCFAM_00496 Yes 7 1
MGYG000002560_CGC64 CGCFAM_00552 Yes 8 2
MGYG000002560_CGC46 CGCFAM_00719 Yes 5 2 beta-glucan
MGYG000002560_CGC25 CGCFAM_00743 Yes 6 1
MGYG000002560_CGC63 CGCFAM_00840 Yes 8 2
MGYG000002560_CGC72 CGCFAM_01059 Yes 3 1
MGYG000002560_CGC35 CGCFAM_01077 Yes 13 6
MGYG000002560_CGC8 CGCFAM_01268 Yes 13 7
Top CAZyme Families