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Cluster: MGYG000002560_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002560_11 MGYG000002560_11_74 89656 92847 + 1.B.14.6.1
TC MGYG000002560_11 MGYG000002560_11_75 92891 94303 + 8.A.46.1.3
CAZyme MGYG000002560_11 MGYG000002560_11_76 94494 97712 - GH2
CAZyme MGYG000002560_11 MGYG000002560_11_77 97724 99739 - GH63
pfam MGYG000002560_11 MGYG000002560_11_78 99815 101335 - SusD_RagB | SusD-like_3
TC MGYG000002560_11 MGYG000002560_11_79 101357 104743 - 1.B.14.6.1
STP MGYG000002560_11 MGYG000002560_11_80 104885 105871 - FecR
TF MGYG000002560_11 MGYG000002560_11_81 106027 106608 - HTH_10
TC MGYG000002560_11 MGYG000002560_11_82 106647 108281 - 3.A.1.121.4
TC MGYG000002560_11 MGYG000002560_11_83 108401 110071 - 2.A.81.1.2
Gene ID: MGYG000002560_11_74
Type: TC
Location: 89656 - 92847 (+)
Gene ID: MGYG000002560_11_75
Type: TC
Location: 92891 - 94303 (+)
Gene ID: MGYG000002560_11_76
Type: CAZyme
Location: 94494 - 97712 (-)
Gene ID: MGYG000002560_11_77
Type: CAZyme
Location: 97724 - 99739 (-)
Gene ID: MGYG000002560_11_78
Type: pfam
Location: 99815 - 101335 (-)
Gene ID: MGYG000002560_11_79
Type: TC
Location: 101357 - 104743 (-)
Gene ID: MGYG000002560_11_80
Type: STP
Location: 104885 - 105871 (-)
Gene ID: MGYG000002560_11_81
Type: TF
Location: 106027 - 106608 (-)
Gene ID: MGYG000002560_11_82
Type: TC
Location: 106647 - 108281 (-)
Gene ID: MGYG000002560_11_83
Type: TC
Location: 108401 - 110071 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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