Cluster: MGYG000002560_CGC35
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_01077
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002560_6 | MGYG000002560_6_97 | 137027 | 140146 | + | 1.B.14.6.1 |
| pfam | MGYG000002560_6 | MGYG000002560_6_98 | 140160 | 141863 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000002560_6 | MGYG000002560_6_99 | 141883 | 142509 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_100 | 142618 | 145212 | + | CBM57 | GH2 |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_101 | 145243 | 147609 | + | GH88 | PL38 |
| pfam | MGYG000002560_6 | MGYG000002560_6_102 | 147628 | 149094 | + | ThuA | ThuA |
| TC | MGYG000002560_6 | MGYG000002560_6_103 | 149922 | 153080 | + | 1.B.14.6.1 |
| pfam | MGYG000002560_6 | MGYG000002560_6_104 | 153102 | 154619 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000002560_6 | MGYG000002560_6_105 | 154640 | 156037 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_106 | 156131 | 157234 | + | GH16_3 |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_107 | 157272 | 159515 | + | GH3 |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_108 | 159530 | 160792 | + | GH5_46 |
| CAZyme | MGYG000002560_6 | MGYG000002560_6_109 | 160810 | 163041 | + | GH3 |
Gene ID: MGYG000002560_6_97
Type: TC
Location: 137027 - 140146 (+)
Type: TC
Location: 137027 - 140146 (+)
Gene ID: MGYG000002560_6_98
Type: pfam
Location: 140160 - 141863 (+)
Type: pfam
Location: 140160 - 141863 (+)
Gene ID: MGYG000002560_6_99
Type:
Location: 141883 - 142509 (+)
Type:
Location: 141883 - 142509 (+)
Gene ID: MGYG000002560_6_100
Type: CAZyme
Location: 142618 - 145212 (+)
Type: CAZyme
Location: 142618 - 145212 (+)
Gene ID: MGYG000002560_6_101
Type: CAZyme
Location: 145243 - 147609 (+)
Type: CAZyme
Location: 145243 - 147609 (+)
Gene ID: MGYG000002560_6_102
Type: pfam
Location: 147628 - 149094 (+)
Type: pfam
Location: 147628 - 149094 (+)
Gene ID: MGYG000002560_6_103
Type: TC
Location: 149922 - 153080 (+)
Type: TC
Location: 149922 - 153080 (+)
Gene ID: MGYG000002560_6_104
Type: pfam
Location: 153102 - 154619 (+)
Type: pfam
Location: 153102 - 154619 (+)
Gene ID: MGYG000002560_6_105
Type:
Location: 154640 - 156037 (+)
Type:
Location: 154640 - 156037 (+)
Gene ID: MGYG000002560_6_106
Type: CAZyme
Location: 156131 - 157234 (+)
Type: CAZyme
Location: 156131 - 157234 (+)
Gene ID: MGYG000002560_6_107
Type: CAZyme
Location: 157272 - 159515 (+)
Type: CAZyme
Location: 157272 - 159515 (+)
Gene ID: MGYG000002560_6_108
Type: CAZyme
Location: 159530 - 160792 (+)
Type: CAZyme
Location: 159530 - 160792 (+)
Gene ID: MGYG000002560_6_109
Type: CAZyme
Location: 160810 - 163041 (+)
Type: CAZyme
Location: 160810 - 163041 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.