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Cluster: MGYG000002560_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002560_1 MGYG000002560_1_446 606793 610233 - 1.B.14.6.2
TC MGYG000002560_1 MGYG000002560_1_447 610681 612345 - 8.A.46.2.2
TC MGYG000002560_1 MGYG000002560_1_448 612366 615533 - 1.B.14.6.2
CAZyme MGYG000002560_1 MGYG000002560_1_449 616007 617398 - GH29
pfam MGYG000002560_1 MGYG000002560_1_450 617543 619183 - SusD-like | SusD-like_2
TC MGYG000002560_1 MGYG000002560_1_451 619225 622617 - 1.B.14.6.2
TC MGYG000002560_1 MGYG000002560_1_452 624090 627500 + 1.B.14.6.2
TC MGYG000002560_1 MGYG000002560_1_453 627521 629398 + 8.A.46.2.2
NULL(UNKNOWN) MGYG000002560_1 MGYG000002560_1_454 629469 630116 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002560_1 MGYG000002560_1_455 630361 632757 + GH3
CAZyme MGYG000002560_1 MGYG000002560_1_456 632921 635116 - GH92
Gene ID: MGYG000002560_1_446
Type: TC
Location: 606793 - 610233 (-)
Gene ID: MGYG000002560_1_447
Type: TC
Location: 610681 - 612345 (-)
Gene ID: MGYG000002560_1_448
Type: TC
Location: 612366 - 615533 (-)
Gene ID: MGYG000002560_1_449
Type: CAZyme
Location: 616007 - 617398 (-)
Gene ID: MGYG000002560_1_450
Type: pfam
Location: 617543 - 619183 (-)
Gene ID: MGYG000002560_1_451
Type: TC
Location: 619225 - 622617 (-)
Gene ID: MGYG000002560_1_452
Type: TC
Location: 624090 - 627500 (+)
Gene ID: MGYG000002560_1_453
Type: TC
Location: 627521 - 629398 (+)
Gene ID: MGYG000002560_1_454
Type:
Location: 629469 - 630116 (+)
Gene ID: MGYG000002560_1_455
Type: CAZyme
Location: 630361 - 632757 (+)
Gene ID: MGYG000002560_1_456
Type: CAZyme
Location: 632921 - 635116 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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