Cluster: MGYG000002560_CGC48
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 9
- Substrate: host glycan
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_00194
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_15 | MGYG000002560_15_29 | 35926 | 37089 | - | CE9 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_30 | 37266 | 39770 | - | GH2 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_31 | 39773 | 42025 | - | GH92 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_32 | 42055 | 44112 | - | GH20 |
| pfam | MGYG000002560_15 | MGYG000002560_15_33 | 44109 | 45188 | - | Kelch_2 | NANM | NANM |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_34 | 45427 | 47751 | - | GH20 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_35 | 47768 | 50335 | - | GH2 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_36 | 50568 | 52640 | - | CE20 | CE3 |
| sulfatase | MGYG000002560_15 | MGYG000002560_15_37 | 52637 | 53302 | - | S1_16 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_38 | 53303 | 55312 | - | GH20 |
| CAZyme | MGYG000002560_15 | MGYG000002560_15_39 | 55313 | 56953 | - | CBM93 | GH33 |
| TC | MGYG000002560_15 | MGYG000002560_15_40 | 57085 | 58587 | - | 8.A.46.1.4 |
| TC | MGYG000002560_15 | MGYG000002560_15_41 | 58601 | 61825 | - | 1.B.14.6.1 |
Gene ID: MGYG000002560_15_29
Type: CAZyme
Location: 35926 - 37089 (-)
Type: CAZyme
Location: 35926 - 37089 (-)
Gene ID: MGYG000002560_15_30
Type: CAZyme
Location: 37266 - 39770 (-)
Type: CAZyme
Location: 37266 - 39770 (-)
Gene ID: MGYG000002560_15_31
Type: CAZyme
Location: 39773 - 42025 (-)
Type: CAZyme
Location: 39773 - 42025 (-)
Gene ID: MGYG000002560_15_32
Type: CAZyme
Location: 42055 - 44112 (-)
Type: CAZyme
Location: 42055 - 44112 (-)
Gene ID: MGYG000002560_15_33
Type: pfam
Location: 44109 - 45188 (-)
Type: pfam
Location: 44109 - 45188 (-)
Gene ID: MGYG000002560_15_34
Type: CAZyme
Location: 45427 - 47751 (-)
Type: CAZyme
Location: 45427 - 47751 (-)
Gene ID: MGYG000002560_15_35
Type: CAZyme
Location: 47768 - 50335 (-)
Type: CAZyme
Location: 47768 - 50335 (-)
Gene ID: MGYG000002560_15_36
Type: CAZyme
Location: 50568 - 52640 (-)
Type: CAZyme
Location: 50568 - 52640 (-)
Gene ID: MGYG000002560_15_37
Type: sulfatase
Location: 52637 - 53302 (-)
Type: sulfatase
Location: 52637 - 53302 (-)
Gene ID: MGYG000002560_15_38
Type: CAZyme
Location: 53303 - 55312 (-)
Type: CAZyme
Location: 53303 - 55312 (-)
Gene ID: MGYG000002560_15_39
Type: CAZyme
Location: 55313 - 56953 (-)
Type: CAZyme
Location: 55313 - 56953 (-)
Gene ID: MGYG000002560_15_40
Type: TC
Location: 57085 - 58587 (-)
Type: TC
Location: 57085 - 58587 (-)
Gene ID: MGYG000002560_15_41
Type: TC
Location: 58601 - 61825 (-)
Type: TC
Location: 58601 - 61825 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.