Cluster: MGYG000002560_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_05201
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_1 | MGYG000002560_1_396 | 524399 | 526651 | + | GH163 |
| CAZyme | MGYG000002560_1 | MGYG000002560_1_397 | 526763 | 528259 | + | GH30_6 |
| NULL(UNKNOWN) | MGYG000002560_1 | MGYG000002560_1_398 | 528845 | 529423 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002560_1 | MGYG000002560_1_399 | 529516 | 532545 | + | 1.B.14.6.1 |
| TC | MGYG000002560_1 | MGYG000002560_1_400 | 532571 | 534337 | + | 8.A.46.1.6 |
| pfam | MGYG000002560_1 | MGYG000002560_1_401 | 534425 | 536224 | + | Arylsulfotrans | Arylsulfotran_2 | Arylsulfotran_N |
| CAZyme | MGYG000002560_1 | MGYG000002560_1_402 | 536357 | 537535 | + | GH130_1 |
| pfam | MGYG000002560_1 | MGYG000002560_1_403 | 537559 | 538410 | + | Exo_endo_phos |
| sulfatase | MGYG000002560_1 | MGYG000002560_1_404 | 538434 | 539336 | + | S1_28 |
| TC | MGYG000002560_1 | MGYG000002560_1_405 | 539355 | 541244 | + | 2.A.21.3.8 |
| peptidase | MGYG000002560_1 | MGYG000002560_1_406 | 541361 | 543466 | - | M03.UPA |
| pfam | MGYG000002560_1 | MGYG000002560_1_407 | 543712 | 546021 | + | FtsX | FtsX | MacB_PCD |
| TC | MGYG000002560_1 | MGYG000002560_1_408 | 546313 | 547695 | + | 8.A.5.1.5 |
Gene ID: MGYG000002560_1_396
Type: CAZyme
Location: 524399 - 526651 (+)
Type: CAZyme
Location: 524399 - 526651 (+)
Gene ID: MGYG000002560_1_397
Type: CAZyme
Location: 526763 - 528259 (+)
Type: CAZyme
Location: 526763 - 528259 (+)
Gene ID: MGYG000002560_1_398
Type:
Location: 528845 - 529423 (+)
Type:
Location: 528845 - 529423 (+)
Gene ID: MGYG000002560_1_399
Type: TC
Location: 529516 - 532545 (+)
Type: TC
Location: 529516 - 532545 (+)
Gene ID: MGYG000002560_1_400
Type: TC
Location: 532571 - 534337 (+)
Type: TC
Location: 532571 - 534337 (+)
Gene ID: MGYG000002560_1_401
Type: pfam
Location: 534425 - 536224 (+)
Type: pfam
Location: 534425 - 536224 (+)
Gene ID: MGYG000002560_1_402
Type: CAZyme
Location: 536357 - 537535 (+)
Type: CAZyme
Location: 536357 - 537535 (+)
Gene ID: MGYG000002560_1_403
Type: pfam
Location: 537559 - 538410 (+)
Type: pfam
Location: 537559 - 538410 (+)
Gene ID: MGYG000002560_1_404
Type: sulfatase
Location: 538434 - 539336 (+)
Type: sulfatase
Location: 538434 - 539336 (+)
Gene ID: MGYG000002560_1_405
Type: TC
Location: 539355 - 541244 (+)
Type: TC
Location: 539355 - 541244 (+)
Gene ID: MGYG000002560_1_406
Type: peptidase
Location: 541361 - 543466 (-)
Type: peptidase
Location: 541361 - 543466 (-)
Gene ID: MGYG000002560_1_407
Type: pfam
Location: 543712 - 546021 (+)
Type: pfam
Location: 543712 - 546021 (+)
Gene ID: MGYG000002560_1_408
Type: TC
Location: 546313 - 547695 (+)
Type: TC
Location: 546313 - 547695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.