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Cluster: MGYG000002560_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002560_2 MGYG000002560_2_1 321 1292 - GH43_29
CAZyme MGYG000002560_2 MGYG000002560_2_2 1296 3275 - GH51_2
CAZyme MGYG000002560_2 MGYG000002560_2_3 3299 4834 - GH43_4
TF MGYG000002560_2 MGYG000002560_2_4 5157 9389 + HTH_AraC
CAZyme MGYG000002560_2 MGYG000002560_2_5 9525 11453 + GH97
NULL(UNKNOWN) MGYG000002560_2 MGYG000002560_2_6 11741 11869 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000002560_2 MGYG000002560_2_7 11909 15118 + 1.B.14.6.1
pfam MGYG000002560_2 MGYG000002560_2_8 15138 16889 + SusD_RagB | SusD-like_3
pfam MGYG000002560_2 MGYG000002560_2_9 16914 18692 + Big_3
CAZyme MGYG000002560_2 MGYG000002560_2_10 18883 20766 + GH43_4
pfam MGYG000002560_2 MGYG000002560_2_11 21477 22958 + tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
TC MGYG000002560_2 MGYG000002560_2_12 23096 25489 - 2.A.21.9.1
Gene ID: MGYG000002560_2_1
Type: CAZyme
Location: 321 - 1292 (-)
Gene ID: MGYG000002560_2_2
Type: CAZyme
Location: 1296 - 3275 (-)
Gene ID: MGYG000002560_2_3
Type: CAZyme
Location: 3299 - 4834 (-)
Gene ID: MGYG000002560_2_4
Type: TF
Location: 5157 - 9389 (+)
Gene ID: MGYG000002560_2_5
Type: CAZyme
Location: 9525 - 11453 (+)
Gene ID: MGYG000002560_2_6
Type:
Location: 11741 - 11869 (-)
Gene ID: MGYG000002560_2_7
Type: TC
Location: 11909 - 15118 (+)
Gene ID: MGYG000002560_2_8
Type: pfam
Location: 15138 - 16889 (+)
Gene ID: MGYG000002560_2_9
Type: pfam
Location: 16914 - 18692 (+)
Gene ID: MGYG000002560_2_10
Type: CAZyme
Location: 18883 - 20766 (+)
Gene ID: MGYG000002560_2_11
Type: pfam
Location: 21477 - 22958 (+)
Gene ID: MGYG000002560_2_12
Type: TC
Location: 23096 - 25489 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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