Cluster: MGYG000002560_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_02933
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_1 | MGYG000002560_1_121 | 161432 | 163003 | - | GH30_4 |
| pfam | MGYG000002560_1 | MGYG000002560_1_122 | 163216 | 163890 | - | DUF3823 | DUF3823_C |
| TC | MGYG000002560_1 | MGYG000002560_1_123 | 163904 | 165754 | - | 8.A.46.1.5 |
| TC | MGYG000002560_1 | MGYG000002560_1_124 | 165770 | 168901 | - | 1.B.14.6.1 |
| TF | MGYG000002560_1 | MGYG000002560_1_125 | 169089 | 173126 | + | HTH_AraC |
| sulfatase | MGYG000002560_1 | MGYG000002560_1_126 | 173289 | 174875 | - | S1_15 |
| CAZyme | MGYG000002560_1 | MGYG000002560_1_127 | 174884 | 177961 | - | PL8_2 |
| TC | MGYG000002560_1 | MGYG000002560_1_128 | 177978 | 179558 | - | 8.A.46.1.3 |
| TC | MGYG000002560_1 | MGYG000002560_1_129 | 179580 | 182723 | - | 1.B.14.6.1 |
| TF | MGYG000002560_1 | MGYG000002560_1_130 | 182883 | 186929 | - | HTH_AraC |
| CAZyme | MGYG000002560_1 | MGYG000002560_1_131 | 187107 | 189968 | + | PL8_2 |
| CAZyme | MGYG000002560_1 | MGYG000002560_1_132 | 190071 | 191297 | + | GH88 |
Gene ID: MGYG000002560_1_121
Type: CAZyme
Location: 161432 - 163003 (-)
Type: CAZyme
Location: 161432 - 163003 (-)
Gene ID: MGYG000002560_1_122
Type: pfam
Location: 163216 - 163890 (-)
Type: pfam
Location: 163216 - 163890 (-)
Gene ID: MGYG000002560_1_123
Type: TC
Location: 163904 - 165754 (-)
Type: TC
Location: 163904 - 165754 (-)
Gene ID: MGYG000002560_1_124
Type: TC
Location: 165770 - 168901 (-)
Type: TC
Location: 165770 - 168901 (-)
Gene ID: MGYG000002560_1_125
Type: TF
Location: 169089 - 173126 (+)
Type: TF
Location: 169089 - 173126 (+)
Gene ID: MGYG000002560_1_126
Type: sulfatase
Location: 173289 - 174875 (-)
Type: sulfatase
Location: 173289 - 174875 (-)
Gene ID: MGYG000002560_1_127
Type: CAZyme
Location: 174884 - 177961 (-)
Type: CAZyme
Location: 174884 - 177961 (-)
Gene ID: MGYG000002560_1_128
Type: TC
Location: 177978 - 179558 (-)
Type: TC
Location: 177978 - 179558 (-)
Gene ID: MGYG000002560_1_129
Type: TC
Location: 179580 - 182723 (-)
Type: TC
Location: 179580 - 182723 (-)
Gene ID: MGYG000002560_1_130
Type: TF
Location: 182883 - 186929 (-)
Type: TF
Location: 182883 - 186929 (-)
Gene ID: MGYG000002560_1_131
Type: CAZyme
Location: 187107 - 189968 (+)
Type: CAZyme
Location: 187107 - 189968 (+)
Gene ID: MGYG000002560_1_132
Type: CAZyme
Location: 190071 - 191297 (+)
Type: CAZyme
Location: 190071 - 191297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.