Cluster: MGYG000002560_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002560
- CGC Family ID: CGCFAM_06593
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002560_3 | MGYG000002560_3_166 | 174694 | 176070 | + | GH23 |
| pfam | MGYG000002560_3 | MGYG000002560_3_167 | 176101 | 176841 | - | YjbH |
| NULL(UNKNOWN) | MGYG000002560_3 | MGYG000002560_3_168 | 176883 | 177101 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002560_3 | MGYG000002560_3_169 | 177158 | 177790 | - | 9.B.18.1.3 |
| NULL(UNKNOWN) | MGYG000002560_3 | MGYG000002560_3_170 | 177805 | 178017 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000002560_3 | MGYG000002560_3_171 | 178054 | 178782 | - | GT2 |
| STP | MGYG000002560_3 | MGYG000002560_3_172 | 178819 | 180282 | - | B12-binding |
| pfam | MGYG000002560_3 | MGYG000002560_3_173 | 180297 | 181286 | - | Acyl_transf_3 |
| CAZyme | MGYG000002560_3 | MGYG000002560_3_174 | 181273 | 182019 | - | GT2 |
| pfam | MGYG000002560_3 | MGYG000002560_3_175 | 182026 | 183048 | - | EpsG |
| pfam | MGYG000002560_3 | MGYG000002560_3_176 | 183045 | 183803 | - | Glycos_transf_2 |
| CAZyme | MGYG000002560_3 | MGYG000002560_3_177 | 183806 | 184621 | - | GT2 |
Gene ID: MGYG000002560_3_166
Type: CAZyme
Location: 174694 - 176070 (+)
Type: CAZyme
Location: 174694 - 176070 (+)
Gene ID: MGYG000002560_3_167
Type: pfam
Location: 176101 - 176841 (-)
Type: pfam
Location: 176101 - 176841 (-)
Gene ID: MGYG000002560_3_168
Type:
Location: 176883 - 177101 (-)
Type:
Location: 176883 - 177101 (-)
Gene ID: MGYG000002560_3_169
Type: TC
Location: 177158 - 177790 (-)
Type: TC
Location: 177158 - 177790 (-)
Gene ID: MGYG000002560_3_170
Type:
Location: 177805 - 178017 (-)
Type:
Location: 177805 - 178017 (-)
Gene ID: MGYG000002560_3_171
Type: CAZyme
Location: 178054 - 178782 (-)
Type: CAZyme
Location: 178054 - 178782 (-)
Gene ID: MGYG000002560_3_172
Type: STP
Location: 178819 - 180282 (-)
Type: STP
Location: 178819 - 180282 (-)
Gene ID: MGYG000002560_3_173
Type: pfam
Location: 180297 - 181286 (-)
Type: pfam
Location: 180297 - 181286 (-)
Gene ID: MGYG000002560_3_174
Type: CAZyme
Location: 181273 - 182019 (-)
Type: CAZyme
Location: 181273 - 182019 (-)
Gene ID: MGYG000002560_3_175
Type: pfam
Location: 182026 - 183048 (-)
Type: pfam
Location: 182026 - 183048 (-)
Gene ID: MGYG000002560_3_176
Type: pfam
Location: 183045 - 183803 (-)
Type: pfam
Location: 183045 - 183803 (-)
Gene ID: MGYG000002560_3_177
Type: CAZyme
Location: 183806 - 184621 (-)
Type: CAZyme
Location: 183806 - 184621 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp902388365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.