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Cluster: MGYG000002560_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002560_3 MGYG000002560_3_31 22519 24072 + 3.B.1.1.2
pfam MGYG000002560_3 MGYG000002560_3_32 24105 25034 + LTD | OAD_gamma
TC MGYG000002560_3 MGYG000002560_3_33 25061 25492 + 3.B.1.1.2
TC MGYG000002560_3 MGYG000002560_3_34 25494 26654 + 3.B.1.1.2
pfam MGYG000002560_3 MGYG000002560_3_35 26829 27077 + Cyc-maltodext_C
pfam MGYG000002560_3 MGYG000002560_3_36 27168 27926 - adh_short | KR | adh_short_C2
CAZyme MGYG000002560_3 MGYG000002560_3_37 27930 28748 - CE1
TC MGYG000002560_3 MGYG000002560_3_38 28848 30569 + 3.A.3.6.10
TF MGYG000002560_3 MGYG000002560_3_39 30580 31029 + FUR
TC MGYG000002560_3 MGYG000002560_3_40 31129 32034 + 9.B.155.2.4
TF MGYG000002560_3 MGYG000002560_3_41 32089 32847 + LytTR
TC MGYG000002560_3 MGYG000002560_3_42 32844 33836 + 9.B.33.1.2
Gene ID: MGYG000002560_3_31
Type: TC
Location: 22519 - 24072 (+)
Gene ID: MGYG000002560_3_32
Type: pfam
Location: 24105 - 25034 (+)
Gene ID: MGYG000002560_3_33
Type: TC
Location: 25061 - 25492 (+)
Gene ID: MGYG000002560_3_34
Type: TC
Location: 25494 - 26654 (+)
Gene ID: MGYG000002560_3_35
Type: pfam
Location: 26829 - 27077 (+)
Gene ID: MGYG000002560_3_36
Type: pfam
Location: 27168 - 27926 (-)
Gene ID: MGYG000002560_3_37
Type: CAZyme
Location: 27930 - 28748 (-)
Gene ID: MGYG000002560_3_38
Type: TC
Location: 28848 - 30569 (+)
Gene ID: MGYG000002560_3_39
Type: TF
Location: 30580 - 31029 (+)
Gene ID: MGYG000002560_3_40
Type: TC
Location: 31129 - 32034 (+)
Gene ID: MGYG000002560_3_41
Type: TF
Location: 32089 - 32847 (+)
Gene ID: MGYG000002560_3_42
Type: TC
Location: 32844 - 33836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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