Genome Details
Selected Rep_genome_ID: HRGMv2_4697
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Species
Agrobacterium pusense
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4697 | 4,953,802 | 98.77% | 0.423% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4697_CGC34 | CGCFAM_00033 | Yes | 13 | 5 | |
| HRGMv2_4697_CGC22 | CGCFAM_00041 | Yes | 12 | 2 | |
| HRGMv2_4697_CGC1 | CGCFAM_00071 | Yes | 4 | 2 | |
| HRGMv2_4697_CGC39 | CGCFAM_01299 | Yes | 4 | 1 | |
| HRGMv2_4697_CGC35 | CGCFAM_01457 | Yes | 3 | 1 | |
| HRGMv2_4697_CGC26 | CGCFAM_01562 | Yes | 6 | 1 | |
| HRGMv2_4697_CGC36 | CGCFAM_02048 | Yes | 6 | 1 | |
| HRGMv2_4697_CGC31 | CGCFAM_02786 | Yes | 4 | 1 | |
| HRGMv2_4697_CGC6 | CGCFAM_03556 | Yes | 4 | 1 | |
| HRGMv2_4697_CGC25 | CGCFAM_04174 | Yes | 10 | 1 | sulfosugar |
| PUL0726_HRGMv2_4697_C0 | CGCFAM_04174 | Yes | 9 | 1 | sulfosugar |
| HRGMv2_4697_CGC44 | CGCFAM_04874 | Yes | 6 | 1 | |
| HRGMv2_4697_CGC15 | CGCFAM_05672 | Yes | 4 | 1 | |
| HRGMv2_4697_CGC11 | CGCFAM_05779 | Yes | 5 | 1 | |
| HRGMv2_4697_CGC3 | CGCFAM_06796 | Yes | 7 | 1 | |
| HRGMv2_4697_CGC17 | CGCFAM_08190 | Yes | 3 | 1 | |
| HRGMv2_4697_CGC40 | CGCFAM_09190 | Yes | 9 | 2 | |
| HRGMv2_4697_CGC18 | CGCFAM_09191 | Yes | 10 | 5 | |
| HRGMv2_4697_CGC14 | CGCFAM_10667 | Yes | 5 | 1 | |
| HRGMv2_4697_CGC30 | CGCFAM_10668 | Yes | 5 | 1 | |
| HRGMv2_4697_CGC52 | CGCFAM_10669 | Yes | 6 | 1 |
Top CAZyme Families