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Cluster: HRGMv2_4697_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_35 39129 40226 + GT4
NULL(UNKNOWN) HRGMv2_4697_4 HRGMv2_4697_4_36 40223 40966 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_37 40958 41920 - GT32
TC HRGMv2_4697_4 HRGMv2_4697_4_38 42131 44023 + 3.A.1.5.11
TC HRGMv2_4697_4 HRGMv2_4697_4_39 44020 45921 + 3.A.1.5.12
TC HRGMv2_4697_4 HRGMv2_4697_4_40 45923 46921 + 3.A.1.5.29
TC HRGMv2_4697_4 HRGMv2_4697_4_41 46918 48093 + 3.A.1.5.12
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_42 48166 49374 + GT1
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_43 49326 50663 + GT4
CAZyme HRGMv2_4697_4 HRGMv2_4697_4_44 50660 51811 + GT1
Gene ID: HRGMv2_4697_4_35
Type: CAZyme
Location: 39129 - 40226 (+)
Gene ID: HRGMv2_4697_4_36
Type:
Location: 40223 - 40966 (+)
Gene ID: HRGMv2_4697_4_37
Type: CAZyme
Location: 40958 - 41920 (-)
Gene ID: HRGMv2_4697_4_38
Type: TC
Location: 42131 - 44023 (+)
Gene ID: HRGMv2_4697_4_39
Type: TC
Location: 44020 - 45921 (+)
Gene ID: HRGMv2_4697_4_40
Type: TC
Location: 45923 - 46921 (+)
Gene ID: HRGMv2_4697_4_41
Type: TC
Location: 46918 - 48093 (+)
Gene ID: HRGMv2_4697_4_42
Type: CAZyme
Location: 48166 - 49374 (+)
Gene ID: HRGMv2_4697_4_43
Type: CAZyme
Location: 49326 - 50663 (+)
Gene ID: HRGMv2_4697_4_44
Type: CAZyme
Location: 50660 - 51811 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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