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Cluster: HRGMv2_4697_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_6 HRGMv2_4697_6_54 61962 62855 - 8.A.5.1.7
pfam HRGMv2_4697_6 HRGMv2_4697_6_55 62855 64012 - Bac_luciferase
TF HRGMv2_4697_6 HRGMv2_4697_6_56 64114 64818 + GntR
TC HRGMv2_4697_6 HRGMv2_4697_6_57 65153 66229 + 3.A.1.1.10
TC HRGMv2_4697_6 HRGMv2_4697_6_58 66277 67527 + 3.A.1.1.41
TC HRGMv2_4697_6 HRGMv2_4697_6_59 67700 68611 + 3.A.1.1.25
TC HRGMv2_4697_6 HRGMv2_4697_6_60 68616 69473 + 3.A.1.1.41
CAZyme HRGMv2_4697_6 HRGMv2_4697_6_61 69485 71476 + GH31_13
TC HRGMv2_4697_6 HRGMv2_4697_6_62 71744 72529 + 3.A.1.17.6
TC HRGMv2_4697_6 HRGMv2_4697_6_63 72526 73476 + 3.A.1.17.6
Gene ID: HRGMv2_4697_6_54
Type: TC
Location: 61962 - 62855 (-)
Gene ID: HRGMv2_4697_6_55
Type: pfam
Location: 62855 - 64012 (-)
Gene ID: HRGMv2_4697_6_56
Type: TF
Location: 64114 - 64818 (+)
Gene ID: HRGMv2_4697_6_57
Type: TC
Location: 65153 - 66229 (+)
Gene ID: HRGMv2_4697_6_58
Type: TC
Location: 66277 - 67527 (+)
Gene ID: HRGMv2_4697_6_59
Type: TC
Location: 67700 - 68611 (+)
Gene ID: HRGMv2_4697_6_60
Type: TC
Location: 68616 - 69473 (+)
Gene ID: HRGMv2_4697_6_61
Type: CAZyme
Location: 69485 - 71476 (+)
Gene ID: HRGMv2_4697_6_62
Type: TC
Location: 71744 - 72529 (+)
Gene ID: HRGMv2_4697_6_63
Type: TC
Location: 72526 - 73476 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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