Cluster: PUL0726_HRGMv2_4697_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: sulfosugar
- Genome ID: HRGMv2_4697
- CGC Family ID: CGCFAM_04174
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_53 | 61438 | 61962 | - | Flavin_Reduct |
| TC | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_54 | 61962 | 62855 | - | 8.A.5.1.7 |
| pfam | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_55 | 62855 | 64012 | - | Bac_luciferase |
| TF | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_56 | 64114 | 64818 | + | GntR |
| TC | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_57 | 65153 | 66229 | + | 3.A.1.1.10 |
| TF | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_58 | 66277 | 67527 | + | HTH_10 |
| TC | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_59 | 67700 | 68611 | + | 3.A.1.1.25 |
| TC | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_60 | 68616 | 69473 | + | 3.A.1.1.41 |
| CAZyme | PUL0726_HRGMv2_4697_C0 | HRGMv2_4697_6_61 | 69485 | 71476 | + | GH31_13 |
Gene ID: HRGMv2_4697_6_53
Type: pfam
Location: 61438 - 61962 (-)
Type: pfam
Location: 61438 - 61962 (-)
Gene ID: HRGMv2_4697_6_54
Type: TC
Location: 61962 - 62855 (-)
Type: TC
Location: 61962 - 62855 (-)
Gene ID: HRGMv2_4697_6_55
Type: pfam
Location: 62855 - 64012 (-)
Type: pfam
Location: 62855 - 64012 (-)
Gene ID: HRGMv2_4697_6_56
Type: TF
Location: 64114 - 64818 (+)
Type: TF
Location: 64114 - 64818 (+)
Gene ID: HRGMv2_4697_6_57
Type: TC
Location: 65153 - 66229 (+)
Type: TC
Location: 65153 - 66229 (+)
Gene ID: HRGMv2_4697_6_58
Type: TF
Location: 66277 - 67527 (+)
Type: TF
Location: 66277 - 67527 (+)
Gene ID: HRGMv2_4697_6_59
Type: TC
Location: 67700 - 68611 (+)
Type: TC
Location: 67700 - 68611 (+)
Gene ID: HRGMv2_4697_6_60
Type: TC
Location: 68616 - 69473 (+)
Type: TC
Location: 68616 - 69473 (+)
Gene ID: HRGMv2_4697_6_61
Type: CAZyme
Location: 69485 - 71476 (+)
Type: CAZyme
Location: 69485 - 71476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Species
Agrobacterium pusense
Gene Composition
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