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Cluster: HRGMv2_4697_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_1 HRGMv2_4697_1_249 268534 269634 + 9.B.146.1.6
pfam HRGMv2_4697_1 HRGMv2_4697_1_250 269638 271047 + Mur_ligase_C | Mur_ligase_M
TC HRGMv2_4697_1 HRGMv2_4697_1_251 271053 272207 + 2.A.103.1.1
CAZyme HRGMv2_4697_1 HRGMv2_4697_1_252 272214 273350 + GT28
pfam HRGMv2_4697_1 HRGMv2_4697_1_253 273347 274762 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
pfam HRGMv2_4697_1 HRGMv2_4697_1_254 274759 275724 + FAD_binding_4 | MurB_C
TC HRGMv2_4697_1 HRGMv2_4697_1_255 275814 277118 - 2.A.1.6.10
Gene ID: HRGMv2_4697_1_249
Type: TC
Location: 268534 - 269634 (+)
Gene ID: HRGMv2_4697_1_250
Type: pfam
Location: 269638 - 271047 (+)
Gene ID: HRGMv2_4697_1_251
Type: TC
Location: 271053 - 272207 (+)
Gene ID: HRGMv2_4697_1_252
Type: CAZyme
Location: 272214 - 273350 (+)
Gene ID: HRGMv2_4697_1_253
Type: pfam
Location: 273347 - 274762 (+)
Gene ID: HRGMv2_4697_1_254
Type: pfam
Location: 274759 - 275724 (+)
Gene ID: HRGMv2_4697_1_255
Type: TC
Location: 275814 - 277118 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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