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Cluster: HRGMv2_4697_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4697_5 HRGMv2_4697_5_241 278479 279456 + 2.A.56.1.5
pfam HRGMv2_4697_5 HRGMv2_4697_5_242 279527 280048 + DctQ
TC HRGMv2_4697_5 HRGMv2_4697_5_243 280049 281329 + 2.A.56.1.5
TF HRGMv2_4697_5 HRGMv2_4697_5_244 281359 282285 - HTH_AraC
TC HRGMv2_4697_5 HRGMv2_4697_5_245 282498 283379 + 3.A.1.1.11
TC HRGMv2_4697_5 HRGMv2_4697_5_246 283384 284268 + 3.A.1.1.11
TC HRGMv2_4697_5 HRGMv2_4697_5_247 284271 285371 + 3.A.1.1.11
TC HRGMv2_4697_5 HRGMv2_4697_5_248 285415 286683 + 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_4697_5 HRGMv2_4697_5_249 286605 286799 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4697_5 HRGMv2_4697_5_250 286900 288351 + GH28
CAZyme HRGMv2_4697_5 HRGMv2_4697_5_251 288360 289454 + GH105
TC HRGMv2_4697_5 HRGMv2_4697_5_252 289559 289795 - 3.D.1.6.4
Gene ID: HRGMv2_4697_5_241
Type: TC
Location: 278479 - 279456 (+)
Gene ID: HRGMv2_4697_5_242
Type: pfam
Location: 279527 - 280048 (+)
Gene ID: HRGMv2_4697_5_243
Type: TC
Location: 280049 - 281329 (+)
Gene ID: HRGMv2_4697_5_244
Type: TF
Location: 281359 - 282285 (-)
Gene ID: HRGMv2_4697_5_245
Type: TC
Location: 282498 - 283379 (+)
Gene ID: HRGMv2_4697_5_246
Type: TC
Location: 283384 - 284268 (+)
Gene ID: HRGMv2_4697_5_247
Type: TC
Location: 284271 - 285371 (+)
Gene ID: HRGMv2_4697_5_248
Type: TC
Location: 285415 - 286683 (+)
Gene ID: HRGMv2_4697_5_249
Type:
Location: 286605 - 286799 (-)
Gene ID: HRGMv2_4697_5_250
Type: CAZyme
Location: 286900 - 288351 (+)
Gene ID: HRGMv2_4697_5_251
Type: CAZyme
Location: 288360 - 289454 (+)
Gene ID: HRGMv2_4697_5_252
Type: TC
Location: 289559 - 289795 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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