dbCAN Logo

Cluster: HRGMv2_4697_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4697_12 HRGMv2_4697_12_43 45440 46906 + GH4
TC HRGMv2_4697_12 HRGMv2_4697_12_44 47013 49100 + 3.A.1.5.7
TC HRGMv2_4697_12 HRGMv2_4697_12_45 49243 50250 + 3.A.1.5.29
TC HRGMv2_4697_12 HRGMv2_4697_12_46 50252 51388 + 3.A.1.5.12
TC HRGMv2_4697_12 HRGMv2_4697_12_47 51401 53068 + 3.A.1.5.24
CAZyme HRGMv2_4697_12 HRGMv2_4697_12_48 53092 54465 + GH4
TC HRGMv2_4697_12 HRGMv2_4697_12_49 54882 55946 + 3.A.1.105.16
TC HRGMv2_4697_12 HRGMv2_4697_12_50 55958 58726 + 3.A.1.105.16
TC HRGMv2_4697_12 HRGMv2_4697_12_51 58723 59841 + 3.A.1.105.16
Gene ID: HRGMv2_4697_12_43
Type: CAZyme
Location: 45440 - 46906 (+)
Gene ID: HRGMv2_4697_12_44
Type: TC
Location: 47013 - 49100 (+)
Gene ID: HRGMv2_4697_12_45
Type: TC
Location: 49243 - 50250 (+)
Gene ID: HRGMv2_4697_12_46
Type: TC
Location: 50252 - 51388 (+)
Gene ID: HRGMv2_4697_12_47
Type: TC
Location: 51401 - 53068 (+)
Gene ID: HRGMv2_4697_12_48
Type: CAZyme
Location: 53092 - 54465 (+)
Gene ID: HRGMv2_4697_12_49
Type: TC
Location: 54882 - 55946 (+)
Gene ID: HRGMv2_4697_12_50
Type: TC
Location: 55958 - 58726 (+)
Gene ID: HRGMv2_4697_12_51
Type: TC
Location: 58723 - 59841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List