Genome Details
Selected Rep_genome_ID: HRGMv2_4630
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas nitroreducens
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4630 | 6,490,871 | 99.58% | 1.984% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4630_CGC22 | CGCFAM_00124 | Yes | 7 | 3 | |
| HRGMv2_4630_CGC8 | CGCFAM_00144 | Yes | 18 | 2 | |
| HRGMv2_4630_CGC1 | CGCFAM_00529 | Yes | 9 | 4 | |
| HRGMv2_4630_CGC7 | CGCFAM_01041 | Yes | 6 | 1 | |
| HRGMv2_4630_CGC31 | CGCFAM_01751 | Yes | 5 | 1 | |
| HRGMv2_4630_CGC25 | CGCFAM_02108 | Yes | 3 | 1 | |
| HRGMv2_4630_CGC18 | CGCFAM_04111 | Yes | 3 | 1 | |
| HRGMv2_4630_CGC14 | CGCFAM_05474 | Yes | 10 | 1 | |
| HRGMv2_4630_CGC37 | CGCFAM_05828 | Yes | 6 | 1 | |
| HRGMv2_4630_CGC40 | CGCFAM_05829 | Yes | 3 | 1 | |
| HRGMv2_4630_CGC39 | CGCFAM_05846 | Yes | 4 | 1 | |
| HRGMv2_4630_CGC35 | CGCFAM_06286 | Yes | 11 | 1 | |
| HRGMv2_4630_CGC41 | CGCFAM_08919 | Yes | 5 | 1 | |
| HRGMv2_4630_CGC13 | CGCFAM_09162 | Yes | 4 | 1 | |
| HRGMv2_4630_CGC15 | CGCFAM_09546 | Yes | 5 | 1 | |
| HRGMv2_4630_CGC26 | CGCFAM_10656 | Yes | 7 | 2 |
Top CAZyme Families