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Cluster: HRGMv2_4630_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_3 HRGMv2_4630_3_247 268338 269249 - GT2
TC HRGMv2_4630_3 HRGMv2_4630_3_248 269793 271331 - 2.A.1.3.2
TC HRGMv2_4630_3 HRGMv2_4630_3_249 271342 272526 - 8.A.1.1.1
TC HRGMv2_4630_3 HRGMv2_4630_3_250 272541 274022 - 1.B.17.3.2
TF HRGMv2_4630_3 HRGMv2_4630_3_251 274025 274498 - MarR
pfam HRGMv2_4630_3 HRGMv2_4630_3_252 274888 276108 - Methyltransf_32
TC HRGMv2_4630_3 HRGMv2_4630_3_253 276175 276867 - 3.A.1.3.23
TC HRGMv2_4630_3 HRGMv2_4630_3_254 276864 277559 - 3.A.1.3.23
TC HRGMv2_4630_3 HRGMv2_4630_3_255 277615 278367 - 3.A.1.3.23
TC HRGMv2_4630_3 HRGMv2_4630_3_256 278382 279155 - 3.A.1.3.23
Gene ID: HRGMv2_4630_3_247
Type: CAZyme
Location: 268338 - 269249 (-)
Gene ID: HRGMv2_4630_3_248
Type: TC
Location: 269793 - 271331 (-)
Gene ID: HRGMv2_4630_3_249
Type: TC
Location: 271342 - 272526 (-)
Gene ID: HRGMv2_4630_3_250
Type: TC
Location: 272541 - 274022 (-)
Gene ID: HRGMv2_4630_3_251
Type: TF
Location: 274025 - 274498 (-)
Gene ID: HRGMv2_4630_3_252
Type: pfam
Location: 274888 - 276108 (-)
Gene ID: HRGMv2_4630_3_253
Type: TC
Location: 276175 - 276867 (-)
Gene ID: HRGMv2_4630_3_254
Type: TC
Location: 276864 - 277559 (-)
Gene ID: HRGMv2_4630_3_255
Type: TC
Location: 277615 - 278367 (-)
Gene ID: HRGMv2_4630_3_256
Type: TC
Location: 278382 - 279155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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