dbCAN Logo

Cluster: HRGMv2_4630_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4630_4 HRGMv2_4630_4_277 303373 303939 - GT4
pfam HRGMv2_4630_4 HRGMv2_4630_4_278 304018 304512 - Glyco_transf_4
TC HRGMv2_4630_4 HRGMv2_4630_4_279 304509 305738 - 3.A.1.103.6
TC HRGMv2_4630_4 HRGMv2_4630_4_280 305738 306523 - 3.A.1.103.6
pfam HRGMv2_4630_4 HRGMv2_4630_4_281 306590 307354 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_4630_4 HRGMv2_4630_4_282 307388 309646 - GT4
CAZyme HRGMv2_4630_4 HRGMv2_4630_4_283 310412 311434 + GT4
Gene ID: HRGMv2_4630_4_277
Type: CAZyme
Location: 303373 - 303939 (-)
Gene ID: HRGMv2_4630_4_278
Type: pfam
Location: 304018 - 304512 (-)
Gene ID: HRGMv2_4630_4_279
Type: TC
Location: 304509 - 305738 (-)
Gene ID: HRGMv2_4630_4_280
Type: TC
Location: 305738 - 306523 (-)
Gene ID: HRGMv2_4630_4_281
Type: pfam
Location: 306590 - 307354 (-)
Gene ID: HRGMv2_4630_4_282
Type: CAZyme
Location: 307388 - 309646 (-)
Gene ID: HRGMv2_4630_4_283
Type: CAZyme
Location: 310412 - 311434 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List