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Cluster: HRGMv2_4630_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4630_11 HRGMv2_4630_11_71 67095 68156 + 1.B.6.1.2
pfam HRGMv2_4630_11 HRGMv2_4630_11_72 68224 68961 - TP_methylase
TC HRGMv2_4630_11 HRGMv2_4630_11_73 68998 71712 - 5.A.3.6.1
pfam HRGMv2_4630_11 HRGMv2_4630_11_74 71748 72077 - Rieske | Rieske_2 | Rieske_4
STP HRGMv2_4630_11 HRGMv2_4630_11_75 72134 74584 - NIR_SIR | NIR_SIR_ferr | Pyr_redox_2
TC HRGMv2_4630_11 HRGMv2_4630_11_76 74857 76665 - 9.B.106.2.2
TC HRGMv2_4630_11 HRGMv2_4630_11_77 76669 77880 - 2.A.1.8.2
pfam HRGMv2_4630_11 HRGMv2_4630_11_78 78200 78628 - 4HBT_2
CAZyme HRGMv2_4630_11 HRGMv2_4630_11_79 78727 79419 - PL7_1
STP HRGMv2_4630_11 HRGMv2_4630_11_80 79643 80221 - ANTAR | Response_reg
TC HRGMv2_4630_11 HRGMv2_4630_11_81 80224 81450 - 3.A.1.16.2
Gene ID: HRGMv2_4630_11_71
Type: TC
Location: 67095 - 68156 (+)
Gene ID: HRGMv2_4630_11_72
Type: pfam
Location: 68224 - 68961 (-)
Gene ID: HRGMv2_4630_11_73
Type: TC
Location: 68998 - 71712 (-)
Gene ID: HRGMv2_4630_11_74
Type: pfam
Location: 71748 - 72077 (-)
Gene ID: HRGMv2_4630_11_75
Type: STP
Location: 72134 - 74584 (-)
Gene ID: HRGMv2_4630_11_76
Type: TC
Location: 74857 - 76665 (-)
Gene ID: HRGMv2_4630_11_77
Type: TC
Location: 76669 - 77880 (-)
Gene ID: HRGMv2_4630_11_78
Type: pfam
Location: 78200 - 78628 (-)
Gene ID: HRGMv2_4630_11_79
Type: CAZyme
Location: 78727 - 79419 (-)
Gene ID: HRGMv2_4630_11_80
Type: STP
Location: 79643 - 80221 (-)
Gene ID: HRGMv2_4630_11_81
Type: TC
Location: 80224 - 81450 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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